Basic Information:

  VIRBase ID:  

VHID00250825

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-3p:  MIMAT0004754          AHCY:  NM_001322084     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-3p	AHCY
miRBase Accession/Entrez ID	MIMAT0004754	191
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	adoHcyase//SAHH

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AHCY	chr20:32869507(-) A-I      intronic chr20:32869564(-) A-I      intronic chr20:32890080(-) A-I      intronic chr20:32890034(-) A-I      intronic chr20:32889977(-) A-I      intronic chr20:32889983(-) A-I      intronic chr20:32877602(-) A-I      intronic chr20:32890033(-) A-I      intronic chr20:32889984(-) A-I      intronic chr20:32874468(-) A-I      intronic chr20:32877570(-) A-I      intronic chr20:32889904(-) A-I      intronic chr20:32875470(-) A-I      intronic chr20:32877358(-) A-I      intronic chr20:32877448(-) A-I      intronic chr20:32887904(-) A-I      intronic chr20:32887908(-) A-I      intronic chr20:32874564(-) A-I      intronic chr20:32875257(-) A-I      intronic chr20:32875259(-) A-I      intronic chr20:32875289(-) A-I      intronic chr20:32875337(-) A-I      intronic chr20:32876301(-) A-I      intronic chr20:32876324(-) A-I      intronic chr20:32876373(-) A-I      intronic chr20:32876450(-) A-I      intronic chr20:32876473(-) A-I      intronic chr20:32876947(-) A-I      intronic chr20:32877015(-) A-I      intronic chr20:32877047(-) A-I      intronic chr20:32877478(-) A-I      intronic chr20:32885174(-) A-I      intronic chr20:32885232(-) A-I      intronic chr20:32885241(-) A-I      intronic chr20:32885274(-) A-I      intronic chr20:32885277(-) A-I      intronic chr20:32885823(-) A-I      intronic chr20:32885845(-) A-I      intronic chr20:32885883(-) A-I      intronic chr20:32885893(-) A-I      intronic chr20:32885901(-) A-I      intronic chr20:32893008(-) A-I      intronic chr20:32893018(-) A-I      intronic chr20:32872130(-) A-I      intronic chr20:32872133(-) A-I      intronic chr20:32872161(-) A-I      intronic chr20:32872169(-) A-I      intronic chr20:32872435(-) A-I      intronic chr20:32872442(-) A-I      intronic chr20:32872461(-) A-I      intronic chr20:32872507(-) A-I      intronic chr20:32872534(-) A-I      intronic chr20:32872547(-) A-I      intronic chr20:32872566(-) A-I      intronic chr20:32873663(-) A-I      intronic chr20:32873835(-) A-I      intronic chr20:32873848(-) A-I      intronic chr20:32885297(-) A-I      intronic chr20:32874558(-) A-I      intronic chr20:32876325(-) A-I      intronic chr20:32872517(-) A-I      intronic chr20:32877654(-) A-I      intronic chr20:32876231(-) A-I      intronic chr20:32889935(-) A-I      intronic chr20:32889971(-) A-I      intronic chr20:32877706(-) A-I      intronic chr20:32876317(-) A-I      intronic chr20:32876349(-) A-I      intronic chr20:32875391(-) A-I      intronic chr20:32873789(-) A-I      intronic chr20:32885268(-) A-I      intronic chr20:32869693(-) A-I      intronic chr20:32875302(-) A-I      intronic chr20:32875335(-) A-I      intronic chr20:32872077(-) A-I      intronic chr20:32872513(-) A-I      intronic chr20:32875329(-) A-I      intronic chr20:32885260(-) A-I      intronic chr20:32873712(-) A-I      intronic chr20:32876433(-) A-I      intronic chr20:32872086(-) A-I      intronic chr20:32877421(-) A-I      intronic chr20:32874517(-) A-I      intronic chr20:32877180(-) A-I      intronic chr20:32873905(-) A-I      intronic chr20:32874540(-) A-I      intronic chr20:32876446(-) A-I      intronic chr20:32875477(-) A-I      intronic chr20:32872529(-) A-I      intronic chr20:32877700(-) A-I      intronic chr20:32873650(-) A-I      intronic chr20:32877557(-) A-I      intronic chr20:32869557(-) A-I      intronic chr20:32869560(-) A-I      intronic chr20:32876333(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AHCY	chr20:32873650(-) A-G intron -    22484847 chr20:32876433(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AHCY	chr20:32868221-32868222(-) m6A 3'UTR//exon       24981863//26404942//27773535 chr20:32868261-32868262(-) m6A 3'UTR//exon       24981863//26404942//27773535 chr20:32868286-32868287(-) m6A 3'UTR//exon       24981863//27773535 chr20:32868342-32868343(-) m6A 3'UTR//exon       24981863//27773535 chr20:32868395-32868396(-) m6A 3'UTR//exon       27773535 chr20:32868482-32868483(-) m6A 3'UTR//exon       26404942 chr20:32873282-32873283(-) m6A CDS//exon       22575960 chr20:32873292-32873293(-) m6A CDS//exon       22575960 chr20:32873435-32873436(-) m6A CDS//exon       27773535 chr20:32878150-32878151(-) m6A CDS//exon       27773535 chr20:32878196-32878197(-) Gm CDS//exon       - chr20:32878209-32878210(-) m6A CDS//exon       27773535 chr20:32878600-32878601(-) Y CDS//exon       26075521 chr20:32879313-32879314(-) m6A CDS//exon       - chr20:32880259-32880260(-) m6A CDS//exon       27773535 chr20:32881344-32881345(-) m6A exon//intron       27773535 chr20:32881376-32881377(-) m6A exon//intron       27773535 chr20:32881410-32881411(-) m6A exon//intron       25456834//24981863//27773535//22608085 chr20:32881451-32881452(-) m6A exon//intron       24284625//25456834//24981863//27773535//22608085 chr20:32881503-32881504(-) m6A exon//intron       24284625//25456834//24981863//27773535//22608085 chr20:32881514-32881515(-) m6A exon//intron       24284625//25456834//24981863//27773535//22608085 chr20:32881575-32881576(-) m6A exon//intron       25456834//24981863//27773535//22608085 chr20:32881636-32881637(-) m6A exon//intron       27773535 chr20:32889672-32889673(-) m6A exon//intron       - chr20:32890153-32890154(-) m6A exon//intron       24981863//22608085 chr20:32890179-32890180(-) m6A exon//intron       24981863//22608085 chr20:32891064-32891065(-) m6A CDS//exon//intron       24981863 chr20:32891123-32891124(-) m6A 5'UTR//exon//intron       25456834//24981863 chr20:32899287-32899288(-) m6A 5'UTR       25456834//24981863 chr20:32899309-32899310(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AHCY	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-3p
Interactor2: AHCY

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg