Basic Information:

  VIRBase ID:  

VHID00250500

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          SPATA12:  NM_181727     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	SPATA12
miRBase Accession/Entrez ID	MIMAT0003343	353324
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SRG5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SPATA12	chr3:57106937(+) A-I      intronic chr3:57106943(+) A-I      intronic chr3:57106953(+) A-I      intronic chr3:57106954(+) A-I      intronic chr3:57106931(+) A-I      intronic chr3:57106923(+) A-I      intronic chr3:57106927(+) A-I      intronic chr3:57106902(+) A-I      intronic chr3:57106959(+) A-I      intronic chr3:57106963(+) A-I      intronic chr3:57106918(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SPATA12	chr3:57107510-57107511(+) m6A 5'UTR       25456834 chr3:57107520-57107521(+) m6A 5'UTR       25456834 chr3:57107611-57107612(+) m6A 5'UTR       24209618//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SPATA12	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: SPATA12

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg