Basic Information:

  VIRBase ID:  

VHID00250231

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          SRRM3:  NM_001291831     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	SRRM3
miRBase Accession/Entrez ID	MIMAT0003343	222183
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SRRM3	chr7:75865031(+) A-I      intronic chr7:75865008(+) A-I      intronic chr7:75859761(+) A-I      intronic chr7:75859758(+) A-I      intronic chr7:75849185(+) A-I      intronic chr7:75849153(+) A-I      intronic chr7:75836948(+) A-I      intronic chr7:75914511(+) A-I      intronic chr7:75836972(+) A-I      intronic chr7:75908532(+) A-I      intronic chr7:75900889(+) A-I      intronic chr7:75900882(+) A-I      intronic chr7:75891884(+) A-I      intronic chr7:75878494(+) A-I      intronic chr7:75878489(+) A-I      intronic chr7:75875839(+) A-I      intronic chr7:75875823(+) A-I      intronic chr7:75853666(+) A-I      intronic chr7:75879501(+) A-I      intronic chr7:75854962(+) A-I      intronic chr7:75887911(+) A-I      intronic chr7:75883819(+) A-I      intronic chr7:75878619(+) A-I      intronic chr7:75881299(+) A-I      intronic chr7:75893758(+) A-I      intronic chr7:75882987(+) A-I      intronic chr7:75836944(+) A-I      intronic chr7:75881231(+) A-I      intronic chr7:75883779(+) A-I      intronic chr7:75891876(+) A-I      intronic chr7:75896120(+) A-I      intronic chr7:75881757(+) A-I      intronic chr7:75888189(+) A-I      intronic chr7:75883455(+) A-I      intronic chr7:75879491(+) A-I      intronic chr7:75878178(+) A-I      intronic chr7:75892900(+) A-I      intronic chr7:75883332(+) A-I      intronic chr7:75888191(+) A-I      intronic chr7:75885013(+) A-I      intronic chr7:75878072(+) A-I      intronic chr7:75892958(+) A-I      intronic chr7:75857252(+) A-I      intronic chr7:75881236(+) A-I      intronic chr7:75878584(+) A-I      intronic chr7:75845562(+) A-I      intronic chr7:75882335(+) A-I      intronic chr7:75862619(+) A-I      intronic chr7:75882621(+) A-I      intronic chr7:75892977(+) A-I      intronic chr7:75882818(+) A-I      intronic chr7:75881899(+) A-I      intronic chr7:75878248(+) A-I      intronic chr7:75887953(+) A-I      intronic chr7:75885575(+) A-I      intronic chr7:75837174(+) A-I      intronic chr7:75886877(+) A-I      intronic chr7:75878219(+) A-I      intronic chr7:75835349(+) A-I      intronic chr7:75887921(+) A-I      intronic chr7:75878120(+) A-I      intronic chr7:75884747(+) A-I      intronic chr7:75834796(+) A-I      intronic chr7:75882407(+) A-I      intronic chr7:75881314(+) A-I      intronic chr7:75886289(+) A-I      intronic chr7:75886970(+) A-I      intronic chr7:75893156(+) A-I      intronic chr7:75878121(+) A-I      intronic chr7:75860343(+) A-I      intronic chr7:75881125(+) A-I      intronic chr7:75879110(+) A-I      intronic chr7:75881244(+) A-I      intronic chr7:75883910(+) A-I      intronic chr7:75888204(+) A-I      intronic chr7:75870961(+) A-I      intronic chr7:75878034(+) A-I      intronic chr7:75879586(+) A-I      intronic chr7:75908345(+) A-I      intronic chr7:75846659(+) A-I      intronic chr7:75885042(+) A-I      intronic chr7:75892014(+) A-I      intronic chr7:75836505(+) A-I      intronic chr7:75883403(+) A-I      intronic chr7:75881338(+) A-I      intronic chr7:75888697(+) A-I      intronic chr7:75887984(+) A-I      intronic chr7:75893071(+) A-I      intronic chr7:75881779(+) A-I      intronic chr7:75883574(+) A-I      intronic chr7:75886905(+) A-I      intronic chr7:75879826(+) A-I      intronic chr7:75894972(+) A-I      intronic chr7:75888271(+) A-I      intronic chr7:75841251(+) A-I      intronic chr7:75878632(+) A-I      intronic chr7:75893602(+) A-I      intronic chr7:75881911(+) A-I      intronic chr7:75882306(+) A-I      intronic chr7:75875867(+) A-I      intronic chr7:75884729(+) A-I      intronic chr7:75892982(+) A-I      intronic chr7:75883737(+) A-I      intronic chr7:75884986(+) A-I      intronic chr7:75838046(+) A-I      intronic chr7:75878226(+) A-I      intronic chr7:75892979(+) A-I      intronic chr7:75894967(+) A-I      intronic chr7:75878470(+) A-I      intronic chr7:75880832(+) A-I      intronic chr7:75882777(+) A-I      intronic chr7:75881785(+) A-I      intronic chr7:75859877(+) A-I      intronic chr7:75839048(+) A-I      intronic chr7:75883845(+) A-I      intronic chr7:75884963(+) A-I      intronic chr7:75881720(+) A-I      intronic chr7:75888283(+) A-I      intronic chr7:75882317(+) A-I      intronic chr7:75852186(+) A-I      intronic chr7:75882762(+) A-I      intronic chr7:75837737(+) A-I      intronic chr7:75886311(+) A-I      intronic chr7:75862580(+) A-I      intronic chr7:75892914(+) A-I      intronic chr7:75878625(+) A-I      intronic chr7:75879624(+) A-I      intronic chr7:75881226(+) A-I      intronic chr7:75885569(+) A-I      intronic chr7:75879786(+) A-I      intronic chr7:75893543(+) A-I      intronic chr7:75883816(+) A-I      intronic chr7:75835459(+) A-I      intronic chr7:75888291(+) A-I      intronic chr7:75879083(+) A-I      intronic chr7:75885046(+) A-I      intronic chr7:75834162(+) A-I      intronic chr7:75888020(+) A-I      intronic chr7:75883888(+) A-I      intronic chr7:75880899(+) A-I      intronic chr7:75877165(+) A-I      intronic chr7:75879667(+) A-I      intronic chr7:75882684(+) A-I      intronic chr7:75885600(+) A-I      intronic chr7:75887778(+) A-I      intronic chr7:75878122(+) A-I      intronic chr7:75886886(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SRRM3	chr7:75870377(+) A-G intron -    22484847 chr7:75870391(+) T-A intron -    22484847 chr7:75870421(+) G-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SRRM3	chr7:75890203-75890204(+) m6A CDS       24981863 chr7:75890728-75890729(+) m6A CDS       25456834 chr7:75911108-75911109(+) m6A CDS       24209618 chr7:75912886-75912887(+) m6A exon//intron       24284625//24981863 chr7:75915076-75915077(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915088-75915089(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915106-75915107(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915166-75915167(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915222-75915223(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915301-75915302(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915311-75915312(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915335-75915336(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915408-75915409(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915425-75915426(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr7:75915479-75915480(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr7:75915551-75915552(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr7:75915964-75915965(+) m6A 3'UTR//exon       24284625//24981863 chr7:75916246-75916247(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr7:75916346-75916347(+) m6A 3'UTR//exon       24284625//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SRRM3	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: SRRM3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg