Detail Information

Basic Information:


  VIRBase ID:  

VHID00250194

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:           ATAD3C:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL70-3p ATAD3C
miRBase
Accession/Entrez ID		 MIMAT0003343 219293
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ATAD3C
chr1:1400044(+) A-I      intronic
chr1:1400072(+) A-I      intronic
chr1:1400030(+) A-I      intronic
chr1:1385549(+) A-I      5'UTR
chr1:1385543(+) A-I      5'UTR
chr1:1400040(+) A-I      intronic
chr1:1400063(+) A-I      intronic
chr1:1404684(+) A-I      3'UTR
chr1:1400446(+) A-I      intronic
chr1:1399563(+) A-I      intronic
chr1:1385601(+) A-I      5'UTR
chr1:1385590(+) A-I      5'UTR
chr1:1404683(+) A-I      3'UTR
chr1:1404676(+) A-I      3'UTR
chr1:1404673(+) A-I      3'UTR
chr1:1400840(+) A-I      intronic
chr1:1404671(+) A-I      3'UTR
chr1:1404581(+) A-I      3'UTR
chr1:1400466(+) A-I      intronic
chr1:1400463(+) A-I      intronic
chr1:1404536(+) A-I      3'UTR
chr1:1400850(+) A-I      intronic
chr1:1385594(+) A-I      5'UTR
chr1:1404990(+) A-I      3'UTR
chr1:1400449(+) A-I      intronic
chr1:1399496(+) A-I      intronic
chr1:1401467(+) A-I      intronic
chr1:1405030(+) A-I      3'UTR
chr1:1385545(+) A-I      5'UTR
chr1:1393874(+) A-I      intronic
chr1:1396648(+) A-I      intronic
chr1:1385688(+) A-I      5'UTR
chr1:1385620(+) A-I      5'UTR
chr1:1385687(+) A-I      5'UTR
chr1:1399587(+) A-I      intronic
chr1:1400860(+) A-I      intronic
chr1:1385540(+) A-I      5'UTR
chr1:1399352(+) A-I      intronic
chr1:1385470(+) A-I      5'UTR
chr1:1399428(+) A-I      intronic
chr1:1404991(+) A-I      3'UTR
chr1:1404408(+) A-I      3'UTR
chr1:1399476(+) A-I      intronic
chr1:1399458(+) A-I      intronic
chr1:1405117(+) A-I      3'UTR
chr1:1386941(+) A-I      intronic
chr1:1386676(+) A-I      intronic
chr1:1399351(+) A-I      intronic
chr1:1404519(+) A-I      3'UTR
chr1:1399378(+) A-I      intronic
chr1:1393277(+) A-I      intronic
chr1:1404409(+) A-I      3'UTR
chr1:1385381(+) A-I      5'UTR
chr1:1404595(+) A-I      3'UTR
chr1:1385520(+) A-I      5'UTR
chr1:1385637(+) A-I      5'UTR
chr1:1385453(+) A-I      5'UTR
chr1:1404764(+) A-I      3'UTR
chr1:1385584(+) A-I      5'UTR
chr1:1385660(+) A-I      5'UTR
chr1:1385558(+) A-I      5'UTR
chr1:1385649(+) A-I      5'UTR
chr1:1389243(+) A-I      intronic
chr1:1404994(+) A-I      3'UTR
chr1:1404498(+) A-I      3'UTR
chr1:1400694(+) A-I      intronic
chr1:1385626(+) A-I      5'UTR
chr1:1399539(+) A-I      intronic
chr1:1404674(+) A-I      3'UTR
chr1:1400066(+) A-I      intronic
chr1:1385454(+) A-I      5'UTR
chr1:1400808(+) A-I      intronic
chr1:1401519(+) A-I      intronic
chr1:1385625(+) A-I      5'UTR
chr1:1385521(+) A-I      5'UTR
chr1:1385554(+) A-I      5'UTR
chr1:1399419(+) A-I      intronic
chr1:1404507(+) A-I      3'UTR
chr1:1385650(+) A-I      5'UTR
chr1:1386668(+) A-I      intronic
chr1:1400285(+) A-I      intronic
chr1:1404678(+) A-I      3'UTR
chr1:1399913(+) A-I      intronic
chr1:1400518(+) A-I      intronic
chr1:1385544(+) A-I      5'UTR
chr1:1404646(+) A-I      3'UTR
chr1:1400004(+) A-I      intronic
chr1:1399370(+) A-I      intronic
chr1:1400495(+) A-I      intronic
chr1:1399995(+) A-I      intronic
chr1:1399422(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ATAD3C
chr1:1385381(+) A-I exon 5'UTR    15342557
chr1:1385453(+) A-I exon 5'UTR    15342557
chr1:1385454(+) A-I exon 5'UTR    15342557
chr1:1385470(+) A-I exon 5'UTR    15342557
chr1:1385520(+) A-I exon 5'UTR    15342557
chr1:1385521(+) A-I exon 5'UTR    15342557
chr1:1385544(+) A-I exon 5'UTR    15342557
chr1:1385545(+) A-I exon 5'UTR    15342557
chr1:1385554(+) A-I exon 5'UTR    15342557
chr1:1385558(+) A-I exon 5'UTR    15342557
chr1:1385584(+) A-I exon 5'UTR    15342557
chr1:1385620(+) A-I exon 5'UTR    15342557
chr1:1385625(+) A-I exon 5'UTR    15342557
chr1:1385626(+) A-I exon 5'UTR    15342557
chr1:1385637(+) A-I exon 5'UTR    15342557
chr1:1385649(+) A-I exon 5'UTR    15342557
chr1:1385650(+) A-I exon 5'UTR    15342557
chr1:1385660(+) A-I exon 5'UTR    15342557
chr1:1385687(+) A-I exon 5'UTR    15342557
chr1:1385688(+) A-I exon 5'UTR    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ATAD3C
chr1:1387772-1387773(+) Y CDS       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ATAD3C
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL70-3p
l-685,458       5479543
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL70-3p
Interactor2: ATAD3C

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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