Basic Information:

  VIRBase ID:  

VHID00249817

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          BBS5:  NM_152384     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	BBS5
miRBase Accession/Entrez ID	MIMAT0003343	129880
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BBS5	chr2:170353678(+) A-I      intronic chr2:170345883(+) A-I      intronic chr2:170346050(+) A-I      intronic chr2:170348406(+) A-I      intronic chr2:170348411(+) A-I      intronic chr2:170348424(+) A-I      intronic chr2:170348441(+) A-I      intronic chr2:170348481(+) A-I      intronic chr2:170348490(+) A-I      intronic chr2:170348814(+) A-I      intronic chr2:170348823(+) A-I      intronic chr2:170348824(+) A-I      intronic chr2:170348848(+) A-I      intronic chr2:170352996(+) A-I      intronic chr2:170353634(+) A-I      intronic chr2:170353669(+) A-I      intronic chr2:170353691(+) A-I      intronic chr2:170353720(+) A-I      intronic chr2:170345834(+) A-I      intronic chr2:170348472(+) A-I      intronic chr2:170345693(+) A-I      intronic chr2:170345831(+) A-I      intronic chr2:170349139(+) A-I      intronic chr2:170345875(+) A-I      intronic chr2:170345879(+) A-I      intronic chr2:170352295(+) A-I      intronic chr2:170352389(+) A-I      intronic chr2:170345721(+) A-I      intronic chr2:170353683(+) A-I      intronic chr2:170352342(+) A-I      intronic chr2:170346784(+) A-I      intronic chr2:170352355(+) A-I      intronic chr2:170353666(+) A-I      intronic chr2:170353062(+) A-I      intronic chr2:170352332(+) A-I      intronic chr2:170352219(+) A-I      intronic chr2:170348407(+) A-I      intronic chr2:170353684(+) A-I      intronic chr2:170345716(+) A-I      intronic chr2:170345519(+) A-I      intronic chr2:170352388(+) A-I      intronic chr2:170348410(+) A-I      intronic chr2:170345953(+) A-I      intronic chr2:170345641(+) A-I      intronic chr2:170345603(+) A-I      intronic chr2:170353628(+) A-I      intronic chr2:170352246(+) A-I      intronic chr2:170352351(+) A-I      intronic chr2:170348449(+) A-I      intronic chr2:170353629(+) A-I      intronic chr2:170352420(+) A-I      intronic chr2:170353797(+) A-I      intronic chr2:170346870(+) A-I      intronic chr2:170352377(+) A-I      intronic chr2:170353739(+) A-I      intronic chr2:170352214(+) A-I      intronic chr2:170345635(+) A-I      intronic chr2:170352227(+) A-I      intronic chr2:170345999(+) A-I      intronic chr2:170348569(+) A-I      intronic chr2:170352305(+) A-I      intronic chr2:170345521(+) A-I      intronic chr2:170352283(+) A-I      intronic chr2:170352307(+) A-I      intronic chr2:170353648(+) A-I      intronic chr2:170352259(+) A-I      intronic chr2:170353757(+) A-I      intronic chr2:170353719(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BBS5	chr2:170352283(+) A-I intron -    21960545 chr2:170340635(+) A-G intron -    22484847 chr2:170345596(+) A-G intron -    22484847 chr2:170345716(+) A-G intron -    22484847 chr2:170345721(+) A-G intron -    22484847 chr2:170345853(+) A-G intron -    22484847 chr2:170348376(+) A-G intron -    22484847 chr2:170348393(+) A-G intron -    22484847 chr2:170348407(+) A-G intron -    22484847 chr2:170348410(+) A-G intron -    22484847 chr2:170348436(+) A-G intron -    22484847 chr2:170348449(+) A-G intron -    22484847 chr2:170352283(+) A-G intron -    22484847 chr2:170352305(+) A-G intron -    22484847 chr2:170352307(+) A-G intron -    22484847 chr2:170353639(+) A-G intron -    22484847 chr2:170353648(+) A-G intron -    22484847 chr2:170353709(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BBS5	chr2:170361004-170361005(+) m6A CDS//exon       24981863//22608085 chr2:170361022-170361023(+) m6A CDS//exon       24981863//22608085 chr2:170361070-170361071(+) m6A CDS//exon       24981863//22608085 chr2:170361455-170361456(+) m6A 3'UTR//exon       24981863//22608085 chr2:170361497-170361498(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr2:170361524-170361525(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr2:170366923-170366924(+) Y intron       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BBS5	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: BBS5

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg