Basic Information:

  VIRBase ID:  

VHID00249512

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          PYGO2:  NM_138300     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	PYGO2
miRBase Accession/Entrez ID	MIMAT0003343	90780
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	1190004M21Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PYGO2	chr1:154929850-154929851(-) m6A 3'UTR       24284625//27773535 chr1:154929903-154929904(-) m6A 3'UTR       24284625 chr1:154930029-154930030(-) m6A 3'UTR       24284625 chr1:154930434-154930435(-) m6A 3'UTR       24284625 chr1:154930473-154930474(-) m6A 3'UTR       24284625 chr1:154930603-154930604(-) m6A 3'UTR       24284625 chr1:154930671-154930672(-) m6A 3'UTR       24284625//24981863 chr1:154930699-154930700(-) m6A 3'UTR       24284625//24981863 chr1:154930762-154930763(-) m6A 3'UTR       24284625//24981863 chr1:154930869-154930870(-) m6A 3'UTR       24284625//27371828 chr1:154931027-154931028(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931060-154931061(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931135-154931136(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931322-154931323(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931594-154931595(-) m6A CDS       24284625//24209618//25456834//22575960 chr1:154931615-154931616(-) m6A CDS       24284625//24209618//25456834 chr1:154931732-154931733(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931788-154931789(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931878-154931879(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:154931954-154931955(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:154931993-154931994(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:154934023-154934024(-) m6A CDS//intron       - chr1:154934801-154934802(-) m6A intron       24284625//27773535//22608085 chr1:154934981-154934982(-) m6A intron       24284625//24981863//26404942//22575960//22608085 chr1:154935038-154935039(-) m6A intron       24981863//26404942//22575960//22608085 chr1:154935059-154935060(-) m6A intron       24981863//26404942//22608085 chr1:154935068-154935069(-) m6A intron       24981863//26404942//22608085 chr1:154935101-154935102(-) m6A intron       24981863 chr1:154935269-154935270(-) m6A intron       27773535 chr1:154935315-154935316(-) m6A intron       27773535 chr1:154935346-154935347(-) m6A intron       27773535 chr1:154935361-154935362(-) m6A intron       27773535 chr1:154935609-154935610(-) m6A intron       24284625 chr1:154935853-154935854(-) m6A intron       24284625//27773535 chr1:154935886-154935887(-) m6A intron       24284625//27773535 chr1:154935920-154935921(-) m6A intron       24284625//27773535 chr1:154935946-154935947(-) m6A intron       24284625//27773535 chr1:154936078-154936079(-) m6A exon       24284625//24981863//26404942 chr1:154936152-154936153(-) m6A exon       24284625//24981863//26404942 chr1:154936210-154936211(-) m6A exon       24284625//25456834//24981863//22575960//22608085 chr1:154936284-154936285(-) m6A exon       24284625//25456834//24981863//27773535//22575960//22608085 chr1:154936314-154936315(-) m6A exon       24284625//25456834//24981863//27773535//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PYGO2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: PYGO2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg