Basic Information:

  VIRBase ID:  

VHID00248912

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          DBNDD1:  NM_024043     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	DBNDD1
miRBase Accession/Entrez ID	MIMAT0003343	79007
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DBNDD1	chr16:90079113(-) A-I      intronic chr16:90080729(-) A-I      intronic chr16:90081337(-) A-I      intronic chr16:90078979(-) A-I      intronic chr16:90079537(-) A-I      intronic chr16:90079250(-) A-I      intronic chr16:90083781(-) A-I      intronic chr16:90079006(-) A-I      intronic chr16:90078989(-) A-I      intronic chr16:90084243(-) A-I      intronic chr16:90073039(-) A-I      intronic chr16:90078727(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DBNDD1	chr16:90071489-90071490(-) m6A 3'UTR//exon       24284625//27773535 chr16:90071609-90071610(-) m6A 3'UTR//exon       24284625//27773535 chr16:90071885-90071886(-) m6A 3'UTR//exon       24284625//27773535 chr16:90072017-90072018(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22608085 chr16:90072029-90072030(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22608085 chr16:90072046-90072047(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22608085 chr16:90072073-90072074(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22608085 chr16:90072108-90072109(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22608085 chr16:90072242-90072243(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22608085 chr16:90072325-90072326(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr16:90072353-90072354(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22608085 chr16:90072426-90072427(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22608085 chr16:90072520-90072521(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr16:90072541-90072542(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr16:90072584-90072585(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr16:90072663-90072664(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22608085 chr16:90072699-90072700(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:90072741-90072742(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:90072746-90072747(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:90072779-90072780(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:90072846-90072847(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536//22608085 chr16:90073227-90073228(-) m6A exon//intron       - chr16:90073302-90073303(-) m6A exon//intron       - chr16:90073346-90073347(-) m6A exon//intron       - chr16:90073390-90073391(-) m6A exon//intron       - chr16:90073436-90073437(-) m6A exon//intron       - chr16:90075214-90075215(-) m6A 3'UTR//CDS//exon       24284625//27773536 chr16:90075256-90075257(-) m6A 3'UTR//CDS//exon       24284625//27773536 chr16:90075283-90075284(-) m6A 3'UTR//CDS//exon       27773536 chr16:90075774-90075775(-) m6A 3'UTR//CDS       24284625 chr16:90075781-90075782(-) m6A 3'UTR//CDS       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DBNDD1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: DBNDD1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg