Basic Information:

  VIRBase ID:  

VHID00248580

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          CBX8:  NM_020649     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	CBX8
miRBase Accession/Entrez ID	MIMAT0003343	57332
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PC3//RC1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CBX8	chr17:77766944-77766945(-) m6A 3'UTR       27371828 chr17:77767152-77767153(-) m6A 3'UTR       27773536 chr17:77767227-77767228(-) m6A 3'UTR       27371828//27773536//22608085 chr17:77767258-77767259(-) m6A 3'UTR       27371828//27773536//22608085 chr17:77767351-77767352(-) m6A 3'UTR       24981863//27371828//27773536//22608085 chr17:77767369-77767370(-) m6A 3'UTR       24981863//27371828//27773536//22608085 chr17:77767381-77767382(-) m6A 3'UTR       25456834//24981863//27371828//27773536//22608085 chr17:77767427-77767428(-) m6A 3'UTR       24981863//27371828//27773536//22608085 chr17:77767499-77767500(-) m6A 3'UTR       24981863//27371828 chr17:77768151-77768152(-) m6A 3'UTR       27773535 chr17:77768461-77768462(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:77768497-77768498(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77768569-77768570(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77768635-77768636(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr17:77768770-77768771(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr17:77768781-77768782(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:77768833-77768834(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:77768839-77768840(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:77768844-77768845(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:77768952-77768953(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr17:77768977-77768978(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr17:77769022-77769023(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77769133-77769134(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77769145-77769146(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77769151-77769152(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77769157-77769158(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:77769226-77769227(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22608085 chr17:77769265-77769266(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536//22608085 chr17:77769332-77769333(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536 chr17:77769869-77769870(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536 chr17:77769882-77769883(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536 chr17:77770087-77770088(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828 chr17:77770098-77770099(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828 chr17:77770890-77770891(-) m6A 5'UTR//intron       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CBX8	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: CBX8

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid
Support Database	RepTar//VmiReg