Basic Information:

  VIRBase ID:  

VHID00248108

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          FGFRL1:  NM_001004356     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	FGFRL1
miRBase Accession/Entrez ID	MIMAT0003343	53834
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FGFR-5//FGFR5//FHFR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FGFRL1	chr4:1006263-1006264(+) m6A 5'UTR       24209618 chr4:1016008-1016009(+) m6A CDS       24284625//24209618 chr4:1016077-1016078(+) m6A CDS       24284625 chr4:1016100-1016101(+) m6A CDS       24284625 chr4:1017488-1017489(+) m6A CDS       24284625 chr4:1017783-1017784(+) m6A CDS       - chr4:1017799-1017800(+) m6A CDS       - chr4:1017814-1017815(+) m6A CDS       - chr4:1018699-1018700(+) m6A CDS       24284625 chr4:1018905-1018906(+) m6A CDS       24284625//24209618//25456834//24981863 chr4:1018911-1018912(+) m6A CDS       24284625//24209618//25456834//24981863 chr4:1019038-1019039(+) m6A CDS       24284625//24209618 chr4:1019049-1019050(+) m6A CDS       24284625//24209618//24981863 chr4:1019175-1019176(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr4:1019183-1019184(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr4:1019224-1019225(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr4:1019286-1019287(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr4:1019300-1019301(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr4:1019444-1019445(+) m6A 3'UTR       27773535 chr4:1019454-1019455(+) m6A 3'UTR       27773535 chr4:1019464-1019465(+) m6A 3'UTR       27773535 chr4:1019477-1019478(+) m6A 3'UTR       27773535 chr4:1019516-1019517(+) m6A 3'UTR       - chr4:1019576-1019577(+) m6A 3'UTR       - chr4:1019605-1019606(+) m6A 3'UTR       - chr4:1019654-1019655(+) m6A 3'UTR       - chr4:1019693-1019694(+) m6A 3'UTR       - chr4:1019724-1019725(+) m6A 3'UTR       - chr4:1019738-1019739(+) m6A 3'UTR       - chr4:1019771-1019772(+) m6A 3'UTR       - chr4:1019810-1019811(+) m6A 3'UTR       - chr4:1019823-1019824(+) m6A 3'UTR       - chr4:1019856-1019857(+) m6A 3'UTR       - chr4:1019887-1019888(+) m6A 3'UTR       - chr4:1020092-1020093(+) m6A 3'UTR       24284625 chr4:1020102-1020103(+) m6A 3'UTR       24284625 chr4:1020175-1020176(+) m6A 3'UTR       24284625//24981863 chr4:1020474-1020475(+) m6A 3'UTR       - chr4:1020488-1020489(+) m6A 3'UTR       - chr4:1020513-1020514(+) m6A 3'UTR       - chr4:1020563-1020564(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FGFRL1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: FGFRL1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg