Basic Information:

  VIRBase ID:  

VHID00247938

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          CDR2L:  NM_014603     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	CDR2L
miRBase Accession/Entrez ID	MIMAT0003343	30850
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HUMPPA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CDR2L	chr17:72987429(+) A-I      intronic chr17:72993394(+) A-I      intronic chr17:72991455(+) A-I      intronic chr17:72991410(+) A-I      intronic chr17:72991447(+) A-I      intronic chr17:72991458(+) A-I      intronic chr17:72987406(+) A-I      intronic chr17:72993395(+) A-I      intronic chr17:72993396(+) A-I      intronic chr17:72987417(+) A-I      intronic chr17:72987418(+) A-I      intronic chr17:72987422(+) A-I      intronic chr17:72989519(+) A-I      intronic chr17:72996345(+) A-I      intronic chr17:72991249(+) A-I      intronic chr17:72989437(+) A-I      intronic chr17:72994195(+) A-I      intronic chr17:72990850(+) A-I      intronic chr17:72994570(+) A-I      intronic chr17:72989507(+) A-I      intronic chr17:72991043(+) A-I      intronic chr17:72994548(+) A-I      intronic chr17:72991030(+) A-I      intronic chr17:72990770(+) A-I      intronic chr17:72994525(+) A-I      intronic chr17:72991460(+) A-I      intronic chr17:72993895(+) A-I      intronic chr17:72991259(+) A-I      intronic chr17:72993800(+) A-I      intronic chr17:72994308(+) A-I      intronic chr17:72994479(+) A-I      intronic chr17:72990804(+) A-I      intronic chr17:72991497(+) A-I      intronic chr17:72992418(+) A-I      intronic chr17:72992419(+) A-I      intronic chr17:72994401(+) A-I      intronic chr17:72989502(+) A-I      intronic chr17:72987236(+) A-I      intronic chr17:72992277(+) A-I      intronic chr17:72994399(+) A-I      intronic chr17:72989477(+) A-I      intronic chr17:72993749(+) A-I      intronic chr17:72994241(+) A-I      intronic chr17:72991218(+) A-I      intronic chr17:72993753(+) A-I      intronic chr17:72993448(+) A-I      intronic chr17:72991807(+) A-I      intronic chr17:72994580(+) A-I      intronic chr17:72993748(+) A-I      intronic chr17:72991441(+) A-I      intronic chr17:72991397(+) A-I      intronic chr17:72991492(+) A-I      intronic chr17:72994562(+) A-I      intronic chr17:72993403(+) A-I      intronic chr17:72990853(+) A-I      intronic chr17:72993436(+) A-I      intronic chr17:72997334(+) A-I      intronic chr17:72989522(+) A-I      intronic chr17:72996006(+) A-I      intronic chr17:72987229(+) A-I      intronic chr17:72991625(+) A-I      intronic chr17:72993435(+) A-I      intronic chr17:72989466(+) A-I      intronic chr17:72991211(+) A-I      intronic chr17:72989472(+) A-I      intronic chr17:72990830(+) A-I      intronic chr17:72989512(+) A-I      intronic chr17:72990728(+) A-I      intronic chr17:72994310(+) A-I      intronic chr17:72994322(+) A-I      intronic chr17:72993929(+) A-I      intronic chr17:72994558(+) A-I      intronic chr17:72992428(+) A-I      intronic chr17:72993706(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CDR2L	chr17:72983777-72983778(+) m6A 5'UTR       24209618//24981863 chr17:72983833-72983834(+) m6A 5'UTR       24209618//24981863 chr17:72983934-72983935(+) m6A 5'UTR       24209618//22575960 chr17:72983950-72983951(+) m6A 5'UTR       24209618 chr17:72984163-72984164(+) m6A CDS       24284625//24209618//24981863 chr17:72984205-72984206(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:72995201-72995202(+) Y intron       26075521 chr17:72995266-72995267(+) Y intron       26075521 chr17:72995627-72995628(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:72995643-72995644(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:72995692-72995693(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:72997454-72997455(+) m6A CDS       24284625//24209618//24981863//22575960 chr17:72997505-72997506(+) m6A CDS       24284625//24209618//22575960 chr17:72997520-72997521(+) m6A CDS       24284625//22575960 chr17:72998168-72998169(+) m6A CDS       24284625//22575960 chr17:72998236-72998237(+) m6A CDS       24284625 chr17:72999359-72999360(+) m6A CDS       24284625 chr17:72999554-72999555(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:72999756-72999757(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr17:72999932-72999933(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:72999954-72999955(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:72999969-72999970(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:73000047-73000048(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:73000060-73000061(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:73000118-73000119(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:73000480-73000481(+) m6A 3'UTR       24284625//24209618//24981863 chr17:73000604-73000605(+) m6A 3'UTR       24284625//24981863 chr17:73000618-73000619(+) m6A 3'UTR       24284625//24981863 chr17:73000651-73000652(+) m6A 3'UTR       24284625//24981863 chr17:73001063-73001064(+) m6A 3'UTR       24284625 chr17:73001451-73001452(+) m6A 3'UTR       24981863 chr17:73001460-73001461(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CDR2L	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: CDR2L

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg