Basic Information:

  VIRBase ID:  

VHID00247410

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          RNF44:  NM_014901     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	RNF44
miRBase Accession/Entrez ID	MIMAT0003343	22838
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF44	chr5:175954324-175954325(-) m6A 3'UTR       24981863 chr5:175954387-175954388(-) m6A 3'UTR       24284625//24981863 chr5:175954416-175954417(-) m6A 3'UTR       24284625//24981863//27773535 chr5:175954465-175954466(-) m6A 3'UTR       24284625//24981863//27773535 chr5:175954485-175954486(-) m6A 3'UTR       24284625//24981863//27773535 chr5:175954546-175954547(-) m6A 3'UTR       24284625//27773535 chr5:175954704-175954705(-) m6A 3'UTR       24284625//24981863//27773535//22575960 chr5:175954855-175954856(-) m6A 3'UTR       24284625//27773535 chr5:175954871-175954872(-) m6A 3'UTR       24284625//27773535 chr5:175954966-175954967(-) m6A 3'UTR       24284625 chr5:175955129-175955130(-) m6A 3'UTR       24284625 chr5:175955139-175955140(-) m6A 3'UTR       - chr5:175955182-175955183(-) m6A 3'UTR       - chr5:175955514-175955515(-) m6A 3'UTR       24981863 chr5:175955521-175955522(-) m6A 3'UTR       24981863 chr5:175955583-175955584(-) m6A 3'UTR       24981863//27773535 chr5:175955664-175955665(-) m6A 3'UTR       27773535 chr5:175955836-175955837(-) m6A 3'UTR       24284625//24981863//27773535 chr5:175955980-175955981(-) m6A 3'UTR       24284625 chr5:175956001-175956002(-) m6A 3'UTR       24284625 chr5:175956547-175956548(-) m6A 3'UTR//CDS//exon       27773535 chr5:175956583-175956584(-) m6A 3'UTR//CDS//exon       27773535 chr5:175956634-175956635(-) m6A 3'UTR//CDS//exon       24284625//27773535 chr5:175956691-175956692(-) m6A exon//intron       24284625//27773535 chr5:175956738-175956739(-) m6A 3'UTR//CDS//exon       27773535 chr5:175956768-175956769(-) m6A 3'UTR//CDS//exon       27773535 chr5:175957180-175957181(-) m6A 3'UTR//CDS//exon       24284625//27773535 chr5:175957703-175957704(-) m6A 3'UTR//CDS       24284625 chr5:175957715-175957716(-) m6A 3'UTR//CDS       24284625 chr5:175957865-175957866(-) m6A 3'UTR//CDS       24284625 chr5:175958619-175958620(-) m6A 3'UTR//CDS       24284625//27773535 chr5:175958994-175958995(-) m6A exon//intron       24284625 chr5:175959398-175959399(-) m6A CDS//exon       24284625 chr5:175963007-175963008(-) m6A exon//intron       24284625 chr5:175963028-175963029(-) m6A exon//intron       24284625 chr5:175963973-175963974(-) m6A 5'UTR//intron       27371828//27773536 chr5:175964029-175964030(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536 chr5:175964089-175964090(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr5:175964132-175964133(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr5:175964175-175964176(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085 chr5:175964229-175964230(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085 chr5:175964266-175964267(-) m6A 5'UTR//intron       25456834//24981863//27371828 chr5:175964790-175964791(-) m6A 5'UTR//exon       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNF44	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: RNF44

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg