Basic Information:

  VIRBase ID:  

VHID00247330

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          TMEM115:  NM_007024     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	TMEM115
miRBase Accession/Entrez ID	MIMAT0003343	11070
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PL6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM115	chr3:50392243-50392244(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:50392274-50392275(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:50392280-50392281(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:50392332-50392333(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr3:50392444-50392445(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr3:50392485-50392486(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr3:50392592-50392593(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr3:50392619-50392620(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr3:50392675-50392676(-) m1A 3'UTR       26863410 chr3:50392766-50392767(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:50392855-50392856(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr3:50392873-50392874(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr3:50392930-50392931(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr3:50395667-50395668(-) m6A CDS       24284625//24209618//27773535//27371828//27773536 chr3:50395772-50395773(-) m6A CDS       24284625//27773535 chr3:50395844-50395845(-) m6A CDS       24284625//27773535 chr3:50396030-50396031(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960 chr3:50396040-50396041(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:50396313-50396314(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:50396372-50396373(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:50396525-50396526(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:50396563-50396564(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:50396651-50396652(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:50396836-50396837(-) m6A 5'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr3:50396986-50396987(-) m6A 5'UTR       25456834//24981863//27773536//22608085 chr3:50397001-50397002(-) m6A 5'UTR       25456834//24981863//27773536//22608085 chr3:50397034-50397035(-) m6A 5'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM115	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: TMEM115

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg