Detail Information

Basic Information:


  VIRBase ID:  

VHID00247307

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:           CBX1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL70-3p CBX1
miRBase
Accession/Entrez ID		 MIMAT0003343 10951
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - CBX//HP1-BETA//HP1Hs-beta//HP1Hsbeta//M31//MOD1//p25beta

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CBX1
chr17:46158196(-) A-I      intronic
chr17:46158197(-) A-I      intronic
chr17:46161755(-) A-I      intronic
chr17:46161751(-) A-I      intronic
chr17:46169912(-) A-I      intronic
chr17:46149485(-) A-I      intronic
chr17:46149465(-) A-I      intronic
chr17:46149498(-) A-I      intronic
chr17:46149492(-) A-I      intronic
chr17:46158159(-) A-I      intronic
chr17:46169931(-) A-I      intronic
chr17:46169940(-) A-I      intronic
chr17:46161780(-) A-I      intronic
chr17:46165118(-) A-I      intronic
chr17:46161758(-) A-I      intronic
chr17:46161752(-) A-I      intronic
chr17:46164055(-) A-I      intronic
chr17:46164075(-) A-I      intronic
chr17:46167345(-) A-I      intronic
chr17:46169927(-) A-I      intronic
chr17:46169953(-) A-I      intronic
chr17:46172161(-) A-I      intronic
chr17:46172164(-) A-I      intronic
chr17:46172165(-) A-I      intronic
chr17:46172192(-) A-I      intronic
chr17:46172246(-) A-I      intronic
chr17:46172300(-) A-I      intronic
chr17:46172301(-) A-I      intronic
chr17:46172786(-) A-I      intronic
chr17:46172789(-) A-I      intronic
chr17:46172795(-) A-I      intronic
chr17:46172819(-) A-I      intronic
chr17:46172851(-) A-I      intronic
chr17:46173375(-) A-I      intronic
chr17:46174015(-) A-I      intronic
chr17:46174017(-) A-I      intronic
chr17:46174903(-) A-I      intronic
chr17:46176603(-) A-I      intronic
chr17:46158938(-) A-I      intronic
chr17:46150362(-) A-I      intronic
chr17:46150442(-) A-I      intronic
chr17:46176619(-) A-I      intronic
chr17:46159050(-) A-I      intronic
chr17:46172371(-) A-I      intronic
chr17:46154731(-) A-I      intronic
chr17:46154924(-) A-I      intronic
chr17:46154947(-) A-I      intronic
chr17:46156898(-) A-I      intronic
chr17:46156984(-) A-I      intronic
chr17:46157000(-) A-I      intronic
chr17:46157147(-) A-I      intronic
chr17:46158100(-) A-I      intronic
chr17:46158128(-) A-I      intronic
chr17:46158135(-) A-I      intronic
chr17:46158200(-) A-I      intronic
chr17:46158965(-) A-I      intronic
chr17:46159620(-) A-I      intronic
chr17:46159635(-) A-I      intronic
chr17:46159675(-) A-I      intronic
chr17:46159742(-) A-I      intronic
chr17:46159764(-) A-I      intronic
chr17:46161700(-) A-I      intronic
chr17:46161786(-) A-I      intronic
chr17:46164035(-) A-I      intronic
chr17:46164046(-) A-I      intronic
chr17:46164052(-) A-I      intronic
chr17:46172867(-) A-I      intronic
chr17:46149645(-) A-I      intronic
chr17:46168913(-) A-I      intronic
chr17:46157016(-) A-I      intronic
chr17:46157089(-) A-I      intronic
chr17:46172872(-) A-I      intronic
chr17:46154876(-) A-I      intronic
chr17:46169405(-) A-I      intronic
chr17:46170551(-) A-I      intronic
chr17:46167450(-) A-I      intronic
chr17:46169980(-) A-I      intronic
chr17:46164979(-) A-I      intronic
chr17:46157501(-) A-I      intronic
chr17:46176550(-) A-I      intronic
chr17:46160325(-) A-I      intronic
chr17:46177379(-) A-I      intronic
chr17:46171727(-) A-I      intronic
chr17:46169236(-) A-I      intronic
chr17:46169723(-) A-I      intronic
chr17:46160928(-) A-I      intronic
chr17:46149451(-) A-I      intronic
chr17:46160940(-) A-I      intronic
chr17:46170024(-) A-I      intronic
chr17:46158532(-) A-I      intronic
chr17:46159500(-) A-I      intronic
chr17:46155344(-) A-I      intronic
chr17:46159076(-) A-I      intronic
chr17:46159392(-) A-I      intronic
chr17:46166647(-) A-I      intronic
chr17:46150427(-) A-I      intronic
chr17:46165557(-) A-I      intronic
chr17:46169736(-) A-I      intronic
chr17:46172044(-) A-I      intronic
chr17:46157073(-) A-I      intronic
chr17:46160941(-) A-I      intronic
chr17:46176629(-) A-I      intronic
chr17:46155272(-) A-I      intronic
chr17:46155265(-) A-I      intronic
chr17:46157686(-) A-I      intronic
chr17:46155399(-) A-I      intronic
chr17:46167437(-) A-I      intronic
chr17:46160062(-) A-I      intronic
chr17:46149497(-) A-I      intronic
chr17:46173968(-) A-I      intronic
chr17:46170086(-) A-I      intronic
chr17:46149455(-) A-I      intronic
chr17:46149905(-) A-I      intronic
chr17:46153997(-) A-I      intronic
chr17:46167375(-) A-I      intronic
chr17:46173502(-) A-I      intronic
chr17:46161714(-) A-I      intronic
chr17:46156030(-) A-I      intronic
chr17:46171910(-) A-I      intronic
chr17:46173407(-) A-I      intronic
chr17:46167445(-) A-I      intronic
chr17:46167447(-) A-I      intronic
chr17:46149553(-) A-I      intronic
chr17:46157581(-) A-I      intronic
chr17:46160103(-) A-I      intronic
chr17:46155585(-) A-I      intronic
chr17:46167446(-) A-I      intronic
chr17:46158835(-) A-I      intronic
chr17:46176694(-) A-I      intronic
chr17:46155429(-) A-I      intronic
chr17:46169068(-) A-I      intronic
chr17:46156642(-) A-I      intronic
chr17:46160058(-) A-I      intronic
chr17:46173971(-) A-I      intronic
chr17:46177335(-) A-I      intronic
chr17:46176747(-) A-I      intronic
chr17:46172880(-) A-I      intronic
chr17:46164731(-) A-I      intronic
chr17:46154849(-) A-I      intronic
chr17:46163319(-) A-I      intronic
chr17:46170574(-) A-I      intronic
chr17:46150932(-) A-I      intronic
chr17:46166591(-) A-I      intronic
chr17:46168764(-) A-I      intronic
chr17:46165068(-) A-I      intronic
chr17:46157523(-) A-I      intronic
chr17:46156006(-) A-I      intronic
chr17:46149536(-) A-I      intronic
chr17:46150476(-) A-I      intronic
chr17:46169214(-) A-I      intronic
chr17:46167125(-) A-I      intronic
chr17:46149524(-) A-I      intronic
chr17:46168765(-) A-I      intronic
chr17:46173380(-) A-I      intronic
chr17:46149500(-) A-I      intronic
chr17:46174021(-) A-I      intronic
chr17:46158098(-) A-I      intronic
chr17:46149639(-) A-I      intronic
chr17:46163320(-) A-I      intronic
chr17:46156331(-) A-I      intronic
chr17:46175544(-) A-I      intronic
chr17:46155963(-) A-I      intronic
chr17:46160009(-) A-I      intronic
chr17:46161936(-) A-I      intronic
chr17:46150402(-) A-I      intronic
chr17:46171869(-) A-I      intronic
chr17:46157039(-) A-I      intronic
chr17:46170009(-) A-I      intronic
chr17:46150401(-) A-I      intronic
chr17:46160036(-) A-I      intronic
chr17:46160645(-) A-I      intronic
chr17:46150372(-) A-I      intronic
chr17:46164991(-) A-I      intronic
chr17:46172829(-) A-I      intronic
chr17:46149506(-) A-I      intronic
chr17:46160126(-) A-I      intronic
chr17:46173415(-) A-I      intronic
chr17:46172364(-) A-I      intronic
chr17:46163302(-) A-I      intronic
chr17:46171265(-) A-I      intronic
chr17:46155368(-) A-I      intronic
chr17:46156029(-) A-I      intronic
chr17:46161713(-) A-I      intronic
chr17:46161498(-) A-I      intronic
chr17:46171261(-) A-I      intronic
chr17:46158968(-) A-I      intronic
chr17:46175491(-) A-I      intronic
chr17:46173381(-) A-I      intronic
chr17:46166601(-) A-I      intronic
chr17:46149504(-) A-I      intronic
chr17:46174085(-) A-I      intronic
chr17:46170188(-) A-I      intronic
chr17:46162264(-) A-I      intronic
chr17:46176561(-) A-I      intronic
chr17:46161821(-) A-I      intronic
chr17:46161537(-) A-I      intronic
chr17:46169861(-) A-I      intronic
chr17:46159077(-) A-I      intronic
chr17:46154918(-) A-I      intronic
chr17:46157026(-) A-I      intronic
chr17:46158161(-) A-I      intronic
chr17:46150424(-) A-I      intronic
chr17:46157020(-) A-I      intronic
chr17:46149906(-) A-I      intronic
chr17:46158933(-) A-I      intronic
chr17:46161472(-) A-I      intronic
chr17:46176366(-) A-I      intronic
chr17:46163263(-) A-I      intronic
chr17:46160571(-) A-I      intronic
chr17:46159356(-) A-I      intronic
chr17:46156606(-) A-I      intronic
chr17:46174829(-) A-I      intronic
chr17:46150612(-) A-I      intronic
chr17:46161147(-) A-I      intronic
chr17:46155098(-) A-I      intronic
chr17:46158501(-) A-I      intronic
chr17:46154693(-) A-I      intronic
chr17:46150408(-) A-I      intronic
chr17:46154856(-) A-I      intronic
chr17:46170506(-) A-I      intronic
chr17:46169737(-) A-I      intronic
chr17:46157514(-) A-I      intronic
chr17:46161022(-) A-I      intronic
chr17:46156931(-) A-I      intronic
chr17:46169998(-) A-I      intronic
chr17:46160326(-) A-I      intronic
chr17:46149533(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CBX1
chr17:46149451(-) A-G intron -    22484847
chr17:46157501(-) A-G intron -    22484847
chr17:46158470(-) T-C intron -    22484847
chr17:46161400(-) T-C intron -    22484847
chr17:46161426(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CBX1
chr17:46148099-46148100(-) m6A 3'UTR       24284625//22608085
chr17:46148122-46148123(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr17:46148151-46148152(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr17:46148178-46148179(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr17:46148188-46148189(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr17:46148264-46148265(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr17:46148517-46148518(-) m6A 3'UTR       27773535
chr17:46148522-46148523(-) m6A 3'UTR       27773535
chr17:46152400-46152401(-) m6A CDS       24981863//27773535
chr17:46153383-46153384(-) m6A CDS       24981863//27773535
chr17:46153451-46153452(-) m6A CDS       24981863//27773535//22575960
chr17:46153463-46153464(-) m6A CDS       24981863//27773535//22575960
chr17:46153510-46153511(-) m6A CDS       24981863//27773535//22575960
chr17:46153534-46153535(-) m6A CDS       24981863//27773535//22575960
chr17:46154349-46154350(-) m6A CDS       24981863//27773535//22575960
chr17:46154354-46154355(-) m6A CDS       24981863//27773535//22575960
chr17:46166106-46166107(-) Y intron       16381836
chr17:46178168-46178169(-) m6A 5'UTR//intron       24209618
chr17:46178183-46178184(-) m6A 5'UTR//intron       24209618
chr17:46178195-46178196(-) m6A 5'UTR//intron       24209618//24981863
chr17:46178289-46178290(-) m6A 5'UTR//intron       25456834//24981863
chr17:46178333-46178334(-) m6A 5'UTR//intron       25456834
chr17:46178396-46178397(-) m6A 5'UTR//intron       25456834
chr17:46178819-46178820(-) m6A 5'UTR       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CBX1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL70-3p
l-685,458       5479543
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL70-3p
Interactor2: CBX1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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