Basic Information:

  VIRBase ID:  

VHID00246780

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          BSN:  NM_003458     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	BSN
miRBase Accession/Entrez ID	MIMAT0003343	8927
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZNF231

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BSN	chr3:49612533(+) A-I      intronic chr3:49658262(+) A-I      intronic chr3:49618652(+) A-I      intronic chr3:49618670(+) A-I      intronic chr3:49618680(+) A-I      intronic chr3:49620939(+) A-I      intronic chr3:49658269(+) A-I      intronic chr3:49618692(+) A-I      intronic chr3:49670628(+) A-I      intronic chr3:49620906(+) A-I      intronic chr3:49618688(+) A-I      intronic chr3:49658272(+) A-I      intronic chr3:49618653(+) A-I      intronic chr3:49612546(+) A-I      intronic chr3:49604036(+) A-I      intronic chr3:49612205(+) A-I      intronic chr3:49673291(+) A-I      intronic chr3:49612254(+) A-I      intronic chr3:49618094(+) A-I      intronic chr3:49603980(+) A-I      intronic chr3:49646609(+) A-I      intronic chr3:49646628(+) A-I      intronic chr3:49629772(+) A-I      intronic chr3:49628290(+) A-I      intronic chr3:49612622(+) A-I      intronic chr3:49604061(+) A-I      intronic chr3:49618096(+) A-I      intronic chr3:49611922(+) A-I      intronic chr3:49670143(+) A-I      intronic chr3:49670584(+) A-I      intronic chr3:49617965(+) A-I      intronic chr3:49673327(+) A-I      intronic chr3:49612149(+) A-I      intronic chr3:49612547(+) A-I      intronic chr3:49649842(+) A-I      intronic chr3:49619021(+) A-I      intronic chr3:49671964(+) A-I      intronic chr3:49604121(+) A-I      intronic chr3:49646797(+) A-I      intronic chr3:49634063(+) A-I      intronic chr3:49611923(+) A-I      intronic chr3:49628283(+) A-I      intronic chr3:49603373(+) A-I      intronic chr3:49629134(+) A-I      intronic chr3:49650487(+) A-I      intronic chr3:49629743(+) A-I      intronic chr3:49617888(+) A-I      intronic chr3:49612333(+) A-I      intronic chr3:49612702(+) A-I      intronic chr3:49673229(+) A-I      intronic chr3:49612634(+) A-I      intronic chr3:49644363(+) A-I      intronic chr3:49618515(+) A-I      intronic chr3:49619004(+) A-I      intronic chr3:49612640(+) A-I      intronic chr3:49618602(+) A-I      intronic chr3:49646764(+) A-I      intronic chr3:49599421(+) A-I      intronic chr3:49628367(+) A-I      intronic chr3:49670608(+) A-I      intronic chr3:49671913(+) A-I      intronic chr3:49604082(+) A-I      intronic chr3:49603291(+) A-I      intronic chr3:49612731(+) A-I      intronic chr3:49646798(+) A-I      intronic chr3:49646674(+) A-I      intronic chr3:49629749(+) A-I      intronic chr3:49616441(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BSN	chr3:49662585-49662586(+) m6A CDS       22575960 chr3:49662622-49662623(+) m6A CDS       22575960 chr3:49679722-49679723(+) m6A CDS       25456834//22608085 chr3:49679752-49679753(+) m6A CDS       25456834//22608085 chr3:49679831-49679832(+) m6A CDS       25456834//22608085 chr3:49679851-49679852(+) m6A CDS       25456834//22608085 chr3:49679879-49679880(+) m6A CDS       25456834//22608085 chr3:49679907-49679908(+) m6A CDS       25456834//22608085 chr3:49680260-49680261(+) m6A CDS       25456834//22575960//22608085 chr3:49680306-49680307(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49680341-49680342(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49680360-49680361(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49680369-49680370(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49680398-49680399(+) m6A CDS       25456834//24981863//22608085 chr3:49680435-49680436(+) m6A CDS       25456834//24981863//22608085 chr3:49688401-49688402(+) m6A CDS//exon       - chr3:49689345-49689346(+) m6A CDS       25456834//24981863 chr3:49689381-49689382(+) m6A CDS       25456834//24981863//22608085 chr3:49689438-49689439(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49689496-49689497(+) m6A CDS       25456834//24981863//22608085 chr3:49689552-49689553(+) m6A CDS       25456834//24981863//22608085 chr3:49689601-49689602(+) m6A CDS       25456834//24981863//22608085 chr3:49689628-49689629(+) m6A CDS       25456834//24981863//22608085 chr3:49689652-49689653(+) m6A CDS       24981863//22608085 chr3:49689755-49689756(+) m6A CDS       24981863 chr3:49689785-49689786(+) m6A CDS       24981863 chr3:49689846-49689847(+) m6A CDS       24981863 chr3:49689858-49689859(+) m6A CDS       24981863 chr3:49689906-49689907(+) m6A CDS       24981863 chr3:49690208-49690209(+) m6A CDS       22608085 chr3:49690218-49690219(+) m6A CDS       22608085 chr3:49690228-49690229(+) m6A CDS       22608085 chr3:49690262-49690263(+) m6A CDS       22608085 chr3:49690618-49690619(+) m6A CDS       22575960 chr3:49690680-49690681(+) m6A CDS       22575960 chr3:49690689-49690690(+) m6A CDS       24981863//22575960 chr3:49690775-49690776(+) m6A CDS       24981863//22575960 chr3:49690818-49690819(+) m6A CDS       24981863//22575960 chr3:49690836-49690837(+) m6A CDS       24981863//22575960 chr3:49690884-49690885(+) m6A CDS       24981863//22575960 chr3:49690977-49690978(+) m6A CDS       24981863//22575960 chr3:49691036-49691037(+) m6A CDS       25456834//24981863 chr3:49691043-49691044(+) m6A CDS       25456834//24981863 chr3:49691126-49691127(+) m6A CDS       25456834 chr3:49691248-49691249(+) m6A CDS       25456834//24981863//22575960 chr3:49691268-49691269(+) m6A CDS       25456834//24981863//22575960 chr3:49691282-49691283(+) m6A CDS       25456834//24981863//22575960 chr3:49691904-49691905(+) m6A CDS       25456834//24981863 chr3:49691966-49691967(+) m6A CDS       25456834//24981863 chr3:49691988-49691989(+) m6A CDS       25456834//24981863 chr3:49692042-49692043(+) m6A CDS       25456834 chr3:49692335-49692336(+) m6A CDS       24981863 chr3:49692367-49692368(+) m6A CDS       24981863 chr3:49692651-49692652(+) m6A CDS       25456834//24981863//22575960 chr3:49693020-49693021(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693032-49693033(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693119-49693120(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr3:49693137-49693138(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr3:49693185-49693186(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693197-49693198(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693314-49693315(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693423-49693424(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693429-49693430(+) m6A CDS       25456834//24981863//22575960//22608085 chr3:49693476-49693477(+) m6A CDS       25456834//22575960//22608085 chr3:49693511-49693512(+) m6A CDS       22575960 chr3:49693522-49693523(+) m6A CDS       22575960 chr3:49694542-49694543(+) m6A CDS       25456834//24981863//22608085 chr3:49694598-49694599(+) m6A CDS       25456834//24981863//22608085 chr3:49694702-49694703(+) m6A CDS       25456834//24981863//22608085 chr3:49694747-49694748(+) m6A CDS       25456834//24981863//22608085 chr3:49694841-49694842(+) m6A CDS       25456834//24981863//22608085 chr3:49694901-49694902(+) m6A CDS       24981863//22608085 chr3:49694990-49694991(+) m6A CDS       22608085 chr3:49695116-49695117(+) m6A CDS       24981863 chr3:49697963-49697964(+) m6A CDS       25456834 chr3:49698111-49698112(+) m6A CDS       25456834//24981863 chr3:49698117-49698118(+) m6A CDS       25456834//24981863 chr3:49698148-49698149(+) m6A CDS       25456834//24981863 chr3:49698255-49698256(+) m6A CDS       25456834//24981863//22608085 chr3:49698318-49698319(+) m6A CDS       25456834//24981863//22608085 chr3:49698378-49698379(+) m6A CDS       25456834//24981863//22608085 chr3:49698966-49698967(+) m6A CDS       24981863//22575960 chr3:49698994-49698995(+) m6A CDS       24981863//22575960//22608085 chr3:49699005-49699006(+) m6A CDS       24981863//22575960//22608085 chr3:49699090-49699091(+) m6A CDS       25456834//22608085 chr3:49699158-49699159(+) m6A CDS       25456834//22608085 chr3:49699903-49699904(+) m6A CDS       25456834//24981863//22608085 chr3:49699918-49699919(+) m6A CDS       25456834//24981863//22608085 chr3:49700335-49700336(+) m6A CDS       25456834 chr3:49700456-49700457(+) m6A CDS       25456834 chr3:49700522-49700523(+) m6A CDS       25456834 chr3:49705140-49705141(+) m6A 3'UTR       25456834 chr3:49705149-49705150(+) m6A 3'UTR       25456834 chr3:49705164-49705165(+) m6A 3'UTR       25456834 chr3:49706473-49706474(+) m6A 3'UTR       25456834 chr3:49707958-49707959(+) m6A 3'UTR       24981863 chr3:49708003-49708004(+) m6A 3'UTR       25456834//24981863//22608085 chr3:49708026-49708027(+) m6A 3'UTR       24981863//22608085 chr3:49708063-49708064(+) m6A 3'UTR       24981863//22608085 chr3:49708806-49708807(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BSN	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: BSN

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg