Basic Information:

  VIRBase ID:  

VHID00246311

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          SIX3:  NM_005413     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	SIX3
miRBase Accession/Entrez ID	MIMAT0003343	6496
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HPE2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SIX3	chr2:45169265-45169266(+) m6A CDS       24981863 chr2:45169808-45169809(+) m6A CDS       25456834 chr2:45169891-45169892(+) m6A CDS       25456834//24981863 chr2:45169925-45169926(+) m6A CDS       25456834//24981863 chr2:45169956-45169957(+) m6A CDS       25456834//24981863 chr2:45170009-45170010(+) m6A CDS       25456834//24981863 chr2:45170045-45170046(+) m6A CDS       25456834 chr2:45171727-45171728(+) m6A CDS       25456834 chr2:45172009-45172010(+) m6A 3'UTR       24981863 chr2:45172089-45172090(+) m6A 3'UTR       25456834//24981863 chr2:45172115-45172116(+) m6A 3'UTR       25456834//24981863 chr2:45172164-45172165(+) m6A 3'UTR       25456834//24981863 chr2:45172180-45172181(+) m6A 3'UTR       25456834//24981863 chr2:45172210-45172211(+) m6A 3'UTR       25456834//24981863 chr2:45172244-45172245(+) m6A 3'UTR       24981863 chr2:45172276-45172277(+) m6A 3'UTR       24981863 chr2:45172385-45172386(+) m6A 3'UTR       25456834//24981863//27773535 chr2:45172404-45172405(+) m6A 3'UTR       25456834//24981863//27773535 chr2:45172477-45172478(+) m6A 3'UTR       25456834//24981863 chr2:45172502-45172503(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SIX3	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: SIX3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg