Basic Information:

  VIRBase ID:  

VHID00246138

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          MAPK13:  NR_072996     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	MAPK13
miRBase Accession/Entrez ID	MIMAT0003343	5603
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MAPK 13//MAPK-13//p38delta//PRKM13//SAPK4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAPK13	chr6:36102409(+) A-I      intronic chr6:36102309(+) A-I      intronic chr6:36102713(+) A-I      intronic chr6:36102641(+) A-I      intronic chr6:36104892(+) A-I      intronic chr6:36102698(+) A-I      intronic chr6:36102270(+) A-I      intronic chr6:36102670(+) A-I      intronic chr6:36102614(+) A-I      intronic chr6:36102249(+) A-I      intronic chr6:36102427(+) A-I      intronic chr6:36102684(+) A-I      intronic chr6:36102372(+) A-I      intronic chr6:36102712(+) A-I      intronic chr6:36102451(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MAPK13	chr6:36102198(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAPK13	chr6:36098407-36098408(+) m6A CDS//exon       - chr6:36098428-36098429(+) m6A CDS//exon       - chr6:36098677-36098678(+) m6A exon//intron       - chr6:36098697-36098698(+) m6A exon//intron       - chr6:36098713-36098714(+) m6A exon//intron       - chr6:36106508-36106509(+) m6A CDS       - chr6:36106751-36106752(+) m6A 3'UTR//CDS       24284625//24981863 chr6:36106800-36106801(+) m6A 3'UTR//CDS       24284625//25456834//24981863 chr6:36106809-36106810(+) m6A 3'UTR//CDS       24284625//25456834 chr6:36107094-36107095(+) m6A 3'UTR//CDS       25456834//24981863//22608085 chr6:36107118-36107119(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr6:36107152-36107153(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr6:36107180-36107181(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr6:36107193-36107194(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr6:36107214-36107215(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr6:36107252-36107253(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr6:36107325-36107326(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr6:36107355-36107356(+) m6A 3'UTR       24284625//25456834//22608085 chr6:36107497-36107498(+) m6A 3'UTR       25456834 chr6:36107512-36107513(+) m6A 3'UTR       25456834 chr6:36107520-36107521(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MAPK13	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: MAPK13

Evidence Support:

Prediction-Evidence	PITA//RNAHybrid
Support Database	VmiReg