Basic Information:

  VIRBase ID:  

VHID00246041

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          PHF1:  NR_027692     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	PHF1
miRBase Accession/Entrez ID	MIMAT0003343	5252
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	hPHF1//MTF2L2//PCL1//PHF2//TDRD19C

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PHF1	chr6:33378494-33378495(+) m6A 5'UTR//intron       25456834//24981863 chr6:33378872-33378873(+) m6A 5'UTR//intron       - chr6:33378932-33378933(+) m6A 5'UTR//intron       - chr6:33380089-33380090(+) m6A CDS       - chr6:33380163-33380164(+) m6A CDS       - chr6:33381256-33381257(+) m6A CDS//exon       - chr6:33381270-33381271(+) m6A CDS//exon       - chr6:33381283-33381284(+) m6A CDS//exon       - chr6:33381356-33381357(+) m6A exon//intron       - chr6:33381407-33381408(+) m6A exon//intron       - chr6:33381458-33381459(+) m6A exon//intron       - chr6:33383165-33383166(+) m6A exon//intron       - chr6:33383418-33383419(+) m6A 3'UTR//CDS//exon       24284625 chr6:33383428-33383429(+) m6A 3'UTR//CDS//exon       24284625 chr6:33383435-33383436(+) m6A 3'UTR//CDS//exon       24284625 chr6:33383443-33383444(+) m6A 3'UTR//CDS//exon       24284625 chr6:33383598-33383599(+) m6A 3'UTR//CDS//exon       24284625 chr6:33383621-33383622(+) m6A 3'UTR//CDS//exon       24284625 chr6:33383870-33383871(+) Y 3'UTR//CDS//exon       26075521 chr6:33384150-33384151(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PHF1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: PHF1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg