Basic Information:

  VIRBase ID:  

VHID00245170

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:  MIMAT0003343          COL9A2:  NM_001852     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-3p	COL9A2
miRBase Accession/Entrez ID	MIMAT0003343	1298
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DJ39G22.4//EDM2//MED//STL5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	COL9A2	chr1:40766200-40766201(-) m6A 3'UTR       27773535 chr1:40766297-40766298(-) m6A 3'UTR       24209618//28052920//27773535 chr1:40766395-40766396(-) m6A 3'UTR//exon       24209618//28052920//27773535 chr1:40766444-40766445(-) m6A 3'UTR//exon       24209618//28052920//27773535 chr1:40766505-40766506(-) m6A 3'UTR//exon       24209618//28052920 chr1:40766562-40766563(-) m6A 3'UTR//exon       24209618//24981863//28052920 chr1:40766701-40766702(-) m6A 3'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536 chr1:40766733-40766734(-) m6A 3'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536 chr1:40766747-40766748(-) m6A 3'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536 chr1:40766762-40766763(-) m6A 3'UTR//exon       24209618//25456834//24981863//28052920//27773535//27371828//27773536 chr1:40766788-40766789(-) m6A 3'UTR//exon       24209618//25456834//28052920//27773535//27371828//27773536 chr1:40766808-40766809(-) m6A 3'UTR//exon       24209618//25456834//28052920//27773535//27371828//27773536 chr1:40766839-40766840(-) m6A 3'UTR//exon       24209618//25456834//27773535//27371828//27773536 chr1:40766928-40766929(-) m6A CDS//exon       27371828//27773536 chr1:40768407-40768408(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40769213-40769214(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40769225-40769226(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40769241-40769242(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40769252-40769253(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40769330-40769331(-) m6A CDS//exon       24209618//25456834//27371828//27773536 chr1:40769481-40769482(-) m6A CDS//exon       24209618//25456834//27371828//27773536 chr1:40769755-40769756(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40769995-40769996(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40770471-40770472(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40770603-40770604(-) m6A exon//intron       24209618//27371828//27773536 chr1:40770632-40770633(-) m6A exon//intron       24209618//27371828//27773536 chr1:40770648-40770649(-) m6A exon//intron       24209618//27371828//27773536 chr1:40770656-40770657(-) m6A exon//intron       24209618//27371828//27773536 chr1:40770663-40770664(-) m6A exon//intron       24209618//27371828//27773536 chr1:40771818-40771819(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40771837-40771838(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40773150-40773151(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40773159-40773160(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40773397-40773398(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40773896-40773897(-) m6A CDS//exon       24209618//27371828//27773536 chr1:40775642-40775643(-) m6A CDS//exon       24209618//27371828 chr1:40776391-40776392(-) m6A CDS//exon       24209618//27371828 chr1:40777206-40777207(-) m6A CDS//exon       27773536 chr1:40777336-40777337(-) m6A CDS//exon       27773536 chr1:40777348-40777349(-) m6A CDS//exon       27773536 chr1:40777366-40777367(-) m6A CDS//exon       27773536 chr1:40777375-40777376(-) m6A CDS//exon       27773536 chr1:40777382-40777383(-) m6A CDS//exon       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	COL9A2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL70-3p	l-685,458       5479543 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-3p
Interactor2: COL9A2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg