Detail Information

Basic Information:


  VIRBase ID:  

VHID00245101

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-3p:           CDC25A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL70-3p CDC25A
miRBase
Accession/Entrez ID		 MIMAT0003343 993
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - CDC25A2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CDC25A
chr3:48204275(-) A-I      intronic
chr3:48204173(-) A-I      intronic
chr3:48204292(-) A-I      intronic
chr3:48212678(-) A-I      intronic
chr3:48202450(-) A-I      intronic
chr3:48212679(-) A-I      intronic
chr3:48204256(-) A-I      intronic
chr3:48202543(-) A-I      intronic
chr3:48202585(-) A-I      intronic
chr3:48202595(-) A-I      intronic
chr3:48202633(-) A-I      intronic
chr3:48203325(-) A-I      intronic
chr3:48203465(-) A-I      intronic
chr3:48203873(-) A-I      intronic
chr3:48202078(-) A-I      intronic
chr3:48202074(-) A-I      intronic
chr3:48202071(-) A-I      intronic
chr3:48202065(-) A-I      intronic
chr3:48202061(-) A-I      intronic
chr3:48202039(-) A-I      intronic
chr3:48201993(-) A-I      intronic
chr3:48201700(-) A-I      intronic
chr3:48210414(-) A-I      intronic
chr3:48202598(-) A-I      intronic
chr3:48203997(-) A-I      intronic
chr3:48203844(-) A-I      intronic
chr3:48204148(-) A-I      intronic
chr3:48210033(-) A-I      intronic
chr3:48210283(-) A-I      intronic
chr3:48204391(-) A-I      intronic
chr3:48202038(-) A-I      intronic
chr3:48203838(-) A-I      intronic
chr3:48202410(-) A-I      intronic
chr3:48203848(-) A-I      intronic
chr3:48209985(-) A-I      intronic
chr3:48210242(-) A-I      intronic
chr3:48214670(-) A-I      intronic
chr3:48203920(-) A-I      intronic
chr3:48202495(-) A-I      intronic
chr3:48203961(-) A-I      intronic
chr3:48202476(-) A-I      intronic
chr3:48202521(-) A-I      intronic
chr3:48201765(-) A-I      intronic
chr3:48215573(-) A-I      intronic
chr3:48204238(-) A-I      intronic
chr3:48210421(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CDC25A
chr3:48223107(-) A-I intron -    22327324
chr3:48223188(-) A-I intron -    22327324
chr3:48223194(-) A-I intron -    22327324
chr3:48223196(-) A-I intron -    22327324
chr3:48223384(-) G-A intron -    22484847
chr3:48201700(-) A-G intron -    22484847
chr3:48202038(-) A-G intron -    22484847
chr3:48202410(-) A-G intron -    22484847
chr3:48202476(-) A-G intron -    22484847
chr3:48202495(-) A-G intron -    22484847
chr3:48202521(-) A-G intron -    22484847
chr3:48202580(-) A-G intron -    22484847
chr3:48202598(-) A-G intron -    22484847
chr3:48202608(-) A-G intron -    22484847
chr3:48203818(-) A-G intron -    22484847
chr3:48203838(-) A-G intron -    22484847
chr3:48203844(-) A-G intron -    22484847
chr3:48203868(-) A-G intron -    22484847
chr3:48203920(-) A-G intron -    22484847
chr3:48203961(-) A-G intron -    22484847
chr3:48203996(-) A-G intron -    22484847
chr3:48203997(-) A-G intron -    22484847
chr3:48204148(-) A-G intron -    22484847
chr3:48204238(-) A-G intron -    22484847
chr3:48209985(-) A-G intron -    22484847
chr3:48210033(-) A-G intron -    22484847
chr3:48210379(-) A-G intron -    22484847
chr3:48210414(-) A-G intron -    22484847
chr3:48210421(-) A-G intron -    22484847
chr3:48218473(-) G-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CDC25A
chr3:48198672-48198673(-) m6A 3'UTR       27773535//22608085
chr3:48199190-48199191(-) m6A 3'UTR       24981863
chr3:48199223-48199224(-) m6A 3'UTR       24981863
chr3:48199277-48199278(-) m6A 3'UTR       24284625//24981863//27773535
chr3:48199346-48199347(-) m6A 3'UTR       24981863//27773535
chr3:48199715-48199716(-) m6A 3'UTR       24981863
chr3:48199740-48199741(-) m6A 3'UTR       24981863
chr3:48199811-48199812(-) m6A 3'UTR       24981863
chr3:48199830-48199831(-) m6A 3'UTR       24981863
chr3:48199883-48199884(-) m6A 3'UTR       24981863//27773535
chr3:48199948-48199949(-) m6A 3'UTR       24981863//27773535
chr3:48200047-48200048(-) m6A 3'UTR       24284625//24981863//27773535
chr3:48200148-48200149(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr3:48200208-48200209(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200300-48200301(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200315-48200316(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200348-48200349(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200363-48200364(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200423-48200424(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200490-48200491(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200519-48200520(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48200531-48200532(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr3:48229288-48229289(-) m6A CDS       27773536
chr3:48229323-48229324(-) m6A CDS       27773536
chr3:48229431-48229432(-) m6A CDS       27773536
chr3:48229569-48229570(-) m6A 5'UTR       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CDC25A
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL70-3p
l-685,458       5479543
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL70-3p
Interactor2: CDC25A

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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