Basic Information:

  VIRBase ID:  

VHID00244305

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:  MIMAT0003342          TTPAL:  NM_001261839     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-5p	TTPAL
miRBase Accession/Entrez ID	MIMAT0003342	79183
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf121

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TTPAL	chr20:43116535(+) A-I      intronic chr20:43114957(+) A-I      intronic chr20:43114956(+) A-I      intronic chr20:43114944(+) A-I      intronic chr20:43114838(+) A-I      intronic chr20:43113705(+) A-I      intronic chr20:43113606(+) A-I      intronic chr20:43113597(+) A-I      intronic chr20:43113594(+) A-I      intronic chr20:43113592(+) A-I      intronic chr20:43113554(+) A-I      intronic chr20:43111707(+) A-I      intronic chr20:43111664(+) A-I      intronic chr20:43111663(+) A-I      intronic chr20:43111598(+) A-I      intronic chr20:43109923(+) A-I      intronic chr20:43109916(+) A-I      intronic chr20:43106741(+) A-I      intronic chr20:43106421(+) A-I      intronic chr20:43116598(+) A-I      intronic chr20:43116592(+) A-I      intronic chr20:43116589(+) A-I      intronic chr20:43122482(+) A-I      3'UTR chr20:43110976(+) A-I      intronic chr20:43114820(+) A-I      intronic chr20:43112545(+) A-I      intronic chr20:43112615(+) A-I      intronic chr20:43113633(+) A-I      intronic chr20:43115828(+) A-I      intronic chr20:43116044(+) A-I      intronic chr20:43112709(+) A-I      intronic chr20:43106395(+) A-I      intronic chr20:43106339(+) A-I      intronic chr20:43113754(+) A-I      intronic chr20:43112697(+) A-I      intronic chr20:43121822(+) A-I      3'UTR chr20:43122679(+) A-I      3'UTR chr20:43106412(+) A-I      intronic chr20:43106684(+) A-I      intronic chr20:43114795(+) A-I      intronic chr20:43106638(+) A-I      intronic chr20:43114774(+) A-I      intronic chr20:43114821(+) A-I      intronic chr20:43106577(+) A-I      intronic chr20:43113574(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TTPAL	chr20:43106636(+) A-I intron -    22327324 chr20:43111151(+) T-C intron -    22484847 chr20:43112665(+) T-C intron -    22484847 chr20:43114774(+) A-G intron -    22484847 chr20:43114782(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TTPAL	chr20:43108626-43108627(+) m6A 5'UTR       24981863 chr20:43115315-43115316(+) m6A CDS//exon//intron       24284625//24981863 chr20:43115341-43115342(+) m6A CDS//exon//intron       24284625//24981863 chr20:43117928-43117929(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085 chr20:43117943-43117944(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22608085 chr20:43117997-43117998(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22608085 chr20:43118287-43118288(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118303-43118304(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118372-43118373(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118401-43118402(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118509-43118510(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118518-43118519(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118555-43118556(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118577-43118578(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118604-43118605(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118628-43118629(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118654-43118655(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118667-43118668(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118688-43118689(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118764-43118765(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118803-43118804(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118822-43118823(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr20:43118849-43118850(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr20:43118905-43118906(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr20:43119002-43119003(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr20:43119230-43119231(+) m6A 3'UTR//exon       24284625//24981863 chr20:43119251-43119252(+) m6A 3'UTR//exon       24284625//24981863 chr20:43119367-43119368(+) m6A 3'UTR//exon       24284625//24981863 chr20:43120395-43120396(+) m6A 3'UTR//exon       24981863 chr20:43120417-43120418(+) m6A 3'UTR//exon       24981863 chr20:43120446-43120447(+) m6A 3'UTR//exon       24981863 chr20:43120454-43120455(+) m6A 3'UTR//exon       24981863 chr20:43120459-43120460(+) m6A 3'UTR       24981863 chr20:43120464-43120465(+) m6A 3'UTR       24981863 chr20:43120470-43120471(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TTPAL	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-5p
Interactor2: TTPAL

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg