Detail Information

Basic Information:


  VIRBase ID:  

VHID00244187

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:           PECR:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL70-5p PECR
miRBase
Accession/Entrez ID		 MIMAT0003342 55825
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - DCRRP//HPDHASE//HSA250303//PVIARL//SDR29C1//TERP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PECR
chr2:216903371(-) A-I      3'UTR
chr2:216903369(-) A-I      3'UTR
chr2:216943265(-) A-I      intronic
chr2:216903406(-) A-I      3'UTR
chr2:216943225(-) A-I      intronic
chr2:216943212(-) A-I      intronic
chr2:216943197(-) A-I      intronic
chr2:216903367(-) A-I      3'UTR
chr2:216909385(-) A-I      intronic
chr2:216903501(-) A-I      3'UTR
chr2:216942108(-) A-I      intronic
chr2:216941825(-) A-I      intronic
chr2:216928098(-) A-I      intronic
chr2:216928158(-) A-I      intronic
chr2:216928161(-) A-I      intronic
chr2:216918898(-) A-I      intronic
chr2:216928186(-) A-I      intronic
chr2:216928241(-) A-I      intronic
chr2:216928259(-) A-I      intronic
chr2:216928284(-) A-I      intronic
chr2:216928335(-) A-I      intronic
chr2:216933463(-) A-I      intronic
chr2:216918910(-) A-I      intronic
chr2:216919286(-) A-I      intronic
chr2:216919309(-) A-I      intronic
chr2:216919735(-) A-I      intronic
chr2:216927026(-) A-I      intronic
chr2:216919262(-) A-I      intronic
chr2:216918196(-) A-I      intronic
chr2:216943242(-) A-I      intronic
chr2:216918105(-) A-I      intronic
chr2:216918099(-) A-I      intronic
chr2:216917717(-) A-I      intronic
chr2:216934599(-) A-I      intronic
chr2:216944641(-) A-I      intronic
chr2:216944621(-) A-I      intronic
chr2:216905581(-) A-I      intronic
chr2:216905587(-) A-I      intronic
chr2:216910728(-) A-I      intronic
chr2:216910734(-) A-I      intronic
chr2:216911229(-) A-I      intronic
chr2:216911238(-) A-I      intronic
chr2:216911869(-) A-I      intronic
chr2:216913270(-) A-I      intronic
chr2:216913324(-) A-I      intronic
chr2:216916659(-) A-I      intronic
chr2:216916744(-) A-I      intronic
chr2:216916860(-) A-I      intronic
chr2:216917653(-) A-I      intronic
chr2:216917679(-) A-I      intronic
chr2:216903629(-) A-I      3'UTR
chr2:216903480(-) A-I      3'UTR
chr2:216903431(-) A-I      3'UTR
chr2:216903615(-) A-I      3'UTR
chr2:216903552(-) A-I      3'UTR
chr2:216903585(-) A-I      3'UTR
chr2:216903612(-) A-I      3'UTR
chr2:216903604(-) A-I      3'UTR
chr2:216905249(-) A-I      intronic
chr2:216905155(-) A-I      intronic
chr2:216928258(-) A-I      intronic
chr2:216927006(-) A-I      intronic
chr2:216916747(-) A-I      intronic
chr2:216928272(-) A-I      intronic
chr2:216919296(-) A-I      intronic
chr2:216905196(-) A-I      intronic
chr2:216919956(-) A-I      intronic
chr2:216919161(-) A-I      intronic
chr2:216925237(-) A-I      intronic
chr2:216905083(-) A-I      intronic
chr2:216943224(-) A-I      intronic
chr2:216905140(-) A-I      intronic
chr2:216926985(-) A-I      intronic
chr2:216905256(-) A-I      intronic
chr2:216919723(-) A-I      intronic
chr2:216944255(-) A-I      intronic
chr2:216918262(-) A-I      intronic
chr2:216910656(-) A-I      intronic
chr2:216941305(-) A-I      intronic
chr2:216943229(-) A-I      intronic
chr2:216903575(-) A-I      3'UTR
chr2:216903422(-) A-I      3'UTR
chr2:216903551(-) A-I      3'UTR
chr2:216903466(-) A-I      3'UTR
chr2:216903510(-) A-I      3'UTR
chr2:216903449(-) A-I      3'UTR
chr2:216903445(-) A-I      3'UTR
chr2:216903594(-) A-I      3'UTR
chr2:216903643(-) A-I      3'UTR
chr2:216903472(-) A-I      3'UTR
chr2:216903566(-) A-I      3'UTR
chr2:216903572(-) A-I      3'UTR
chr2:216903543(-) A-I      3'UTR
chr2:216903482(-) A-I      3'UTR
chr2:216903544(-) A-I      3'UTR
chr2:216903419(-) A-I      3'UTR
chr2:216903502(-) A-I      3'UTR
chr2:216903442(-) A-I      3'UTR
chr2:216903620(-) A-I      3'UTR
chr2:216903498(-) A-I      3'UTR
chr2:216905088(-) A-I      intronic
chr2:216944972(-) A-I      intronic
chr2:216925386(-) A-I      intronic
chr2:216907618(-) A-I      intronic
chr2:216939949(-) A-I      intronic
chr2:216941854(-) A-I      intronic
chr2:216928097(-) A-I      intronic
chr2:216916771(-) A-I      intronic
chr2:216905591(-) A-I      intronic
chr2:216916797(-) A-I      intronic
chr2:216941269(-) A-I      intronic
chr2:216918239(-) A-I      intronic
chr2:216919197(-) A-I      intronic
chr2:216928117(-) A-I      intronic
chr2:216917705(-) A-I      intronic
chr2:216905508(-) A-I      intronic
chr2:216921222(-) A-I      intronic
chr2:216941054(-) A-I      intronic
chr2:216926890(-) A-I      intronic
chr2:216919187(-) A-I      intronic
chr2:216919301(-) A-I      intronic
chr2:216925140(-) A-I      intronic
chr2:216916895(-) A-I      intronic
chr2:216919272(-) A-I      intronic
chr2:216905472(-) A-I      intronic
chr2:216913236(-) A-I      intronic
chr2:216926947(-) A-I      intronic
chr2:216925236(-) A-I      intronic
chr2:216939058(-) A-I      intronic
chr2:216919997(-) A-I      intronic
chr2:216913250(-) A-I      intronic
chr2:216905482(-) A-I      intronic
chr2:216905518(-) A-I      intronic
chr2:216928308(-) A-I      intronic
chr2:216919332(-) A-I      intronic
chr2:216913311(-) A-I      intronic
chr2:216939088(-) A-I      intronic
chr2:216920048(-) A-I      intronic
chr2:216905250(-) A-I      intronic
chr2:216905335(-) A-I      intronic
chr2:216926909(-) A-I      intronic
chr2:216925128(-) A-I      intronic
chr2:216931549(-) A-I      intronic
chr2:216944913(-) A-I      intronic
chr2:216919326(-) A-I      intronic
chr2:216907995(-) A-I      intronic
chr2:216941301(-) A-I      intronic
chr2:216920012(-) A-I      intronic
chr2:216920038(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PECR
chr2:216903396(-) A-I exon 3'UTR    15258596
chr2:216903419(-) A-I exon 3'UTR    15258596
chr2:216903422(-) A-I exon 3'UTR    15258596
chr2:216903430(-) A-I exon 3'UTR    15258596
chr2:216903498(-) A-I exon 3'UTR    15258596   //22327324
chr2:216903510(-) A-I exon 3'UTR    15258596
chr2:216903544(-) A-I exon 3'UTR    15258596   //22327324
chr2:216903594(-) A-I exon 3'UTR    15258596
chr2:216903643(-) A-I exon 3'UTR    15258596
chr2:216903472(-) A-I exon 3'UTR    22327324
chr2:216903482(-) A-I exon 3'UTR    22327324
chr2:216903621(-) A-I exon 3'UTR    22327324
chr2:216903544(-) A-G exon 3'UTR    21725310   //22484847
chr2:216903419(-) A-G exon 3'UTR    22484847
chr2:216903426(-) A-G exon 3'UTR    22484847
chr2:216903430(-) A-G exon 3'UTR    22484847
chr2:216903442(-) A-G exon 3'UTR    22484847
chr2:216903445(-) A-G exon 3'UTR    22484847
chr2:216903449(-) A-G exon 3'UTR    22484847
chr2:216903466(-) A-G exon 3'UTR    22484847
chr2:216903472(-) A-G exon 3'UTR    22484847
chr2:216903482(-) A-G exon 3'UTR    22484847
chr2:216903498(-) A-G exon 3'UTR    22484847
chr2:216903543(-) A-G exon 3'UTR    22484847
chr2:216903549(-) A-G exon 3'UTR    22484847
chr2:216903551(-) A-G exon 3'UTR    22484847
chr2:216903561(-) A-G exon 3'UTR    22484847
chr2:216903567(-) A-G exon 3'UTR    22484847
chr2:216903575(-) A-G exon 3'UTR    22484847
chr2:216903620(-) A-G exon 3'UTR    22484847
chr2:216903621(-) A-G exon 3'UTR    22484847
chr2:216903643(-) A-G exon 3'UTR    22484847
chr2:216905470(-) A-G intron -    22484847
chr2:216905472(-) A-G intron -    22484847
chr2:216905482(-) A-G intron -    22484847
chr2:216905518(-) A-G intron -    22484847
chr2:216905589(-) A-G intron -    22484847
chr2:216905591(-) A-G intron -    22484847
chr2:216916826(-) A-G intron -    22484847
chr2:216918234(-) A-G intron -    22484847
chr2:216919219(-) A-G intron -    22484847
chr2:216919296(-) A-G intron -    22484847
chr2:216919301(-) A-G intron -    22484847
chr2:216919326(-) A-G intron -    22484847
chr2:216919331(-) A-G intron -    22484847
chr2:216919332(-) A-G intron -    22484847
chr2:216921446(-) C-T intron -    22484847
chr2:216928097(-) A-G intron -    22484847
chr2:216928117(-) A-G intron -    22484847
chr2:216928175(-) A-G intron -    22484847
chr2:216928258(-) A-G intron -    22484847
chr2:216928272(-) A-G intron -    22484847
chr2:216928308(-) A-G intron -    22484847
chr2:216941054(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PECR
chr2:216878257-216878258(-) m6A intron       25456834//24981863
chr2:216878270-216878271(-) m6A intron       25456834//24981863
chr2:216903290-216903291(-) m6A 3'UTR//intron       27773535
chr2:216903328-216903329(-) m6A 3'UTR//intron       24981863//27773535
chr2:216903334-216903335(-) m6A 3'UTR//intron       24981863//27773535
chr2:216903343-216903344(-) m6A 3'UTR//intron       24981863//27773535
chr2:216903360-216903361(-) m6A 3'UTR//intron       24981863//27773535
chr2:216903429-216903430(-) m6A 3'UTR//intron       24981863//27773535
chr2:216903506-216903507(-) m6A 3'UTR//intron       24981863
chr2:216903512-216903513(-) m6A 3'UTR//intron       24981863
chr2:216903521-216903522(-) m6A 3'UTR//intron       24981863
chr2:216947533-216947534(-) m6A exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PECR
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL70-5p
Interactor2: PECR

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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