Basic Information:

  VIRBase ID:  

VHID00244184

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:  MIMAT0003342          LRP2BP:  NM_001385602     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-5p	LRP2BP
miRBase Accession/Entrez ID	MIMAT0003342	55805
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LRP2BP	chr4:186287816(-) A-I      3'UTR chr4:186287823(-) A-I      3'UTR chr4:186287822(-) A-I      3'UTR chr4:186287795(-) A-I      3'UTR chr4:186287817(-) A-I      3'UTR chr4:186287821(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	LRP2BP	chr4:186298456(-) A-I intron -    15342557   //15258596 chr4:186298461(-) A-I intron -    15342557   //15258596 chr4:186298462(-) A-I intron -    15342557   //15258596 chr4:186298476(-) A-I intron -    15342557   //15258596 chr4:186298507(-) A-I intron -    15342557   //15258596 chr4:186298510(-) A-I intron -    15342557   //15258596 chr4:186298544(-) A-I intron -    15342557   //15258596 chr4:186298560(-) A-I intron -    15342557   //15258596 chr4:186298572(-) A-I intron -    15342557   //15258596 chr4:186298585(-) A-I intron -    15342557   //15258596 chr4:186298589(-) A-I intron -    15342557   //15258596 chr4:186299544(-) A-I exon 5'UTR    15342557 chr4:186296291(-) A-I intron -    22327324 chr4:186298549(-) T-C intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRP2BP	chr4:186299308-186299309(-) m6A 5'UTR//CDS       - chr4:186299605-186299606(-) m6A 5'UTR//intron       24284625//25456834//22608085 chr4:186299618-186299619(-) m6A 5'UTR//intron       - chr4:186299630-186299631(-) m6A 5'UTR//intron       24284625 chr4:186299787-186299788(-) m6A 5'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LRP2BP	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-5p
Interactor2: LRP2BP

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep
Support Database	RepTar//VmiReg