Basic Information:

  VIRBase ID:  

VHID00243806

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:  MIMAT0003342          IER3:  NM_003897     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-5p	IER3
miRBase Accession/Entrez ID	MIMAT0003342	8870
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DIF-2//DIF2//GLY96//IEX-1//IEX-1L//IEX1//PRG1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IER3	chr6:30711003-30711004(-) m6A 3'UTR       24284625//27773535 chr6:30711027-30711028(-) Gm 3'UTR       - chr6:30711135-30711136(-) m6A 3'UTR       24284625//24209618//27773535 chr6:30711145-30711146(-) m6A 3'UTR       24284625//24209618//27773535 chr6:30711255-30711256(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:30711287-30711288(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:30711296-30711297(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:30711311-30711312(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr6:30711525-30711526(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:30711541-30711542(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711557-30711558(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711595-30711596(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711602-30711603(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711620-30711621(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711663-30711664(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711674-30711675(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr6:30711752-30711753(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:30711764-30711765(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:30711941-30711942(-) m6A CDS       24284625//24209618//27773535//22575960 chr6:30711946-30711947(-) m6A CDS       24284625//24209618//27773535//22575960 chr6:30712217-30712218(-) m6A CDS       24284625//25456834//24981863//27371828//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IER3	Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-5p
Interactor2: IER3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg