Basic Information:

  VIRBase ID:  

VHID00243617

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:  MIMAT0003342          MDFI:  NM_001300804     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-5p	MDFI
miRBase Accession/Entrez ID	MIMAT0003342	4188
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	I-MF//I-mfa

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MDFI	chr6:41618546(+) A-I      intronic chr6:41618492(+) A-I      intronic chr6:41618477(+) A-I      intronic chr6:41618473(+) A-I      intronic chr6:41618448(+) A-I      intronic chr6:41618331(+) A-I      intronic chr6:41618572(+) A-I      intronic chr6:41618783(+) A-I      intronic chr6:41618786(+) A-I      intronic chr6:41618788(+) A-I      intronic chr6:41618447(+) A-I      intronic chr6:41618906(+) A-I      intronic chr6:41618824(+) A-I      intronic chr6:41618798(+) A-I      intronic chr6:41618793(+) A-I      intronic chr6:41618792(+) A-I      intronic chr6:41618791(+) A-I      intronic chr6:41618748(+) A-I      intronic chr6:41618729(+) A-I      intronic chr6:41618825(+) A-I      intronic chr6:41618920(+) A-I      intronic chr6:41618802(+) A-I      intronic chr6:41618707(+) A-I      intronic chr6:41615798(+) A-I      intronic chr6:41615799(+) A-I      intronic chr6:41618907(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MDFI	chr6:41604821-41604822(+) m6A 5'UTR//intron       24981863 chr6:41604860-41604861(+) m6A 5'UTR//intron       24981863 chr6:41606089-41606090(+) m6A 5'UTR//intron       25456834//24981863 chr6:41606303-41606304(+) m6A 5'UTR//intron       25456834//24981863//27371828 chr6:41613868-41613869(+) m6A CDS//intron       - chr6:41614007-41614008(+) m6A CDS//exon//intron       - chr6:41617371-41617372(+) m6A CDS//exon       - chr6:41621125-41621126(+) m6A CDS       25456834 chr6:41621158-41621159(+) m6A CDS       25456834 chr6:41621227-41621228(+) m6A CDS       25456834 chr6:41621263-41621264(+) m6A CDS       25456834 chr6:41621390-41621391(+) m6A 3'UTR       24209618//25456834//24981863 chr6:41621457-41621458(+) m6A 3'UTR       24209618//25456834//24981863 chr6:41621541-41621542(+) m6A 3'UTR       24209618 chr6:41621747-41621748(+) m6A 3'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MDFI	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-5p
Interactor2: MDFI

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg