Basic Information:

  VIRBase ID:  

VHID00243578

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:  MIMAT0003342          HTR2A:  NM_001165947     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL70-5p	HTR2A
miRBase Accession/Entrez ID	MIMAT0003342	3356
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	5-HT2A//HTR2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HTR2A	chr13:47450693(-) A-I      intronic chr13:47450823(-) A-I      intronic chr13:47450683(-) A-I      intronic chr13:47464477(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HTR2A	chr13:47409011-47409012(-) m6A CDS       24209618 chr13:47409075-47409076(-) m6A CDS       24209618 chr13:47409106-47409107(-) m6A CDS       24209618 chr13:47409152-47409153(-) m6A CDS       24209618 chr13:47409175-47409176(-) m6A CDS       24209618 chr13:47409182-47409183(-) m6A CDS       24209618 chr13:47409231-47409232(-) m6A CDS       24209618 chr13:47469766-47469767(-) m6A CDS//intron       24209618 chr13:47469884-47469885(-) m6A CDS//intron       24209618 chr13:47469905-47469906(-) m6A CDS//intron       24209618 chr13:47469994-47469995(-) m6A CDS//intron       24209618 chr13:47470158-47470159(-) m6A 5'UTR//intron       24209618 chr13:47470180-47470181(-) m6A 5'UTR//intron       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HTR2A	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL70-5p
Interactor2: HTR2A

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg