Detail Information

Basic Information:


  VIRBase ID:  

VHID00243511

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL70-5p:           EPHA2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL70-5p EPHA2
miRBase
Accession/Entrez ID		 MIMAT0003342 1969
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - ARCC2//CTPA//CTPP1//CTRCT6//ECK

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EPHA2
chr1:16462534(-) A-I      intronic
chr1:16457227(-) A-I      intronic
chr1:16462520(-) A-I      intronic
chr1:16463944(-) A-I      intronic
chr1:16463958(-) A-I      intronic
chr1:16462498(-) A-I      intronic
chr1:16463912(-) A-I      intronic
chr1:16457293(-) A-I      intronic
chr1:16463032(-) A-I      intronic
chr1:16462894(-) A-I      intronic
chr1:16462842(-) A-I      intronic
chr1:16462871(-) A-I      intronic
chr1:16463031(-) A-I      intronic
chr1:16463909(-) A-I      intronic
chr1:16469817(-) A-I      intronic
chr1:16462904(-) A-I      intronic
chr1:16462995(-) A-I      intronic
chr1:16463993(-) A-I      intronic
chr1:16457989(-) A-I      intronic
chr1:16464030(-) A-I      intronic
chr1:16462641(-) A-I      intronic
chr1:16462639(-) A-I      intronic
chr1:16457963(-) A-I      intronic
chr1:16464055(-) A-I      intronic
chr1:16457217(-) A-I      intronic
chr1:16462638(-) A-I      intronic
chr1:16457294(-) A-I      intronic
chr1:16462539(-) A-I      intronic
chr1:16457953(-) A-I      intronic
chr1:16457992(-) A-I      intronic
chr1:16457285(-) A-I      intronic
chr1:16462848(-) A-I      intronic
chr1:16457397(-) A-I      intronic
chr1:16457912(-) A-I      intronic
chr1:16462458(-) A-I      intronic
chr1:16463002(-) A-I      intronic
chr1:16457926(-) A-I      intronic
chr1:16462477(-) A-I      intronic
chr1:16457931(-) A-I      intronic
chr1:16457273(-) A-I      intronic
chr1:16464087(-) A-I      intronic
chr1:16463971(-) A-I      intronic
chr1:16462932(-) A-I      intronic
chr1:16458028(-) A-I      intronic
chr1:16462517(-) A-I      intronic
chr1:16457414(-) A-I      intronic
chr1:16457135(-) A-I      intronic
chr1:16463568(-) A-I      intronic
chr1:16462612(-) A-I      intronic
chr1:16462870(-) A-I      intronic
chr1:16463088(-) A-I      intronic
chr1:16457398(-) A-I      intronic
chr1:16463929(-) A-I      intronic
chr1:16462490(-) A-I      intronic
chr1:16462554(-) A-I      intronic
chr1:16457249(-) A-I      intronic
chr1:16462468(-) A-I      intronic
chr1:16462486(-) A-I      intronic
chr1:16463920(-) A-I      intronic
chr1:16462481(-) A-I      intronic
chr1:16457222(-) A-I      intronic
chr1:16462504(-) A-I      intronic
chr1:16462413(-) A-I      intronic
chr1:16457292(-) A-I      intronic
chr1:16462530(-) A-I      intronic
chr1:16457263(-) A-I      intronic
chr1:16462565(-) A-I      intronic
chr1:16460898(-) A-I      intronic
chr1:16462308(-) A-I      intronic
chr1:16457253(-) A-I      intronic
chr1:16462448(-) A-I      intronic
chr1:16463111(-) A-I      intronic
chr1:16457289(-) A-I      intronic
chr1:16463849(-) A-I      intronic
chr1:16462858(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EPHA2
chr1:16450929-16450930(-) m6A 3'UTR       27773535
chr1:16451032-16451033(-) m6A 3'UTR       27773535
chr1:16451040-16451041(-) m6A 3'UTR       27773535
chr1:16451057-16451058(-) m6A 3'UTR       27773535
chr1:16451071-16451072(-) m6A 3'UTR       27773535
chr1:16451189-16451190(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:16451224-16451225(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:16451262-16451263(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16451277-16451278(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16451284-16451285(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16451326-16451327(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16451422-16451423(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16451548-16451549(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16451621-16451622(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27773536//22575960
chr1:16451662-16451663(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27773536//22575960
chr1:16451731-16451732(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536
chr1:16451740-16451741(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536
chr1:16451748-16451749(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536
chr1:16456742-16456743(-) m6A CDS       24284625//27773535
chr1:16456774-16456775(-) m6A CDS       24284625//27773535
chr1:16456867-16456868(-) m6A CDS       24284625//27773535
chr1:16458340-16458341(-) m6A CDS       24284625
chr1:16458682-16458683(-) m6A CDS       24284625
chr1:16459751-16459752(-) m6A CDS//exon       24284625//24981863//26404942//22575960
chr1:16459827-16459828(-) m6A CDS//exon       24284625//24981863//22575960
chr1:16460052-16460053(-) m6A CDS//exon       24284625//22575960
chr1:16460070-16460071(-) m6A CDS       24284625//22575960
chr1:16460080-16460081(-) m6A CDS       24284625//22575960
chr1:16460401-16460402(-) m6A CDS       24284625//27773535
chr1:16461613-16461614(-) m6A CDS//exon       24284625
chr1:16461679-16461680(-) m6A CDS//exon       24284625//27773535
chr1:16464350-16464351(-) m6A CDS//exon       24284625//27773535//22575960
chr1:16464439-16464440(-) m6A CDS//exon       24284625//24981863//27773535//27773536//22575960
chr1:16464486-16464487(-) m6A CDS//exon       24284625//24981863//27773535//27773536//22575960
chr1:16464558-16464559(-) m6A CDS//exon       24284625//24981863//27773536
chr1:16464583-16464584(-) m6A CDS//exon       24284625//24981863//27773536
chr1:16464601-16464602(-) m6A CDS//exon       24284625
chr1:16464792-16464793(-) m6A CDS//exon       24284625//22575960
chr1:16472931-16472932(-) m6A exon//intron       24284625//25456834//24981863//22575960
chr1:16475000-16475001(-) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr1:16475055-16475056(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:16475309-16475310(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16475315-16475316(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16475343-16475344(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr1:16475462-16475463(-) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//22575960
chr1:16475525-16475526(-) m6A CDS//exon       24284625//24209618//27773535//27773536//22575960
chr1:16475537-16475538(-) m6A CDS//exon       24284625//24209618//27773535//27773536//22575960
chr1:16477445-16477446(-) m6A CDS//intron       24284625//24209618//27773536//22575960
chr1:16482447-16482448(-) m6A 5'UTR//exon       24209618//25456834//24981863//27773536//22575960
chr1:16482505-16482506(-) m6A 5'UTR//exon       24209618//25456834//24981863//27773536//22575960
chr1:16482556-16482557(-) m6A 5'UTR       24209618//25456834//24981863//27773536//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EPHA2
Cytosol HeLa-S3 cells     -
Exosome Blood     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL70-5p
Interactor2: EPHA2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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