Basic Information:

  VIRBase ID:  

VHID00239404

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          WIPF3:  NM_001391973     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	WIPF3
miRBase Accession/Entrez ID	MIMAT0001584	644150
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CR16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WIPF3	chr7:29925338(+) A-I      intronic chr7:29925217(+) A-I      intronic chr7:29926053(+) A-I      intronic chr7:29926066(+) A-I      intronic chr7:29926091(+) A-I      intronic chr7:29934804(+) A-I      intronic chr7:29925334(+) A-I      intronic chr7:29926173(+) A-I      intronic chr7:29926073(+) A-I      intronic chr7:29956359(+) A-I      3'UTR chr7:29956116(+) A-I      3'UTR chr7:29956129(+) A-I      3'UTR chr7:29956130(+) A-I      3'UTR chr7:29956132(+) A-I      3'UTR chr7:29956352(+) A-I      3'UTR chr7:29956356(+) A-I      3'UTR chr7:29941398(+) A-I      intronic chr7:29896062(+) A-I      intronic chr7:29956340(+) A-I      3'UTR chr7:29925148(+) A-I      intronic chr7:29934796(+) A-I      intronic chr7:29935778(+) A-I      intronic chr7:29925245(+) A-I      intronic chr7:29896097(+) A-I      intronic chr7:29925357(+) A-I      intronic chr7:29925333(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WIPF3	chr7:29874304-29874305(+) m6A 5'UTR       24209618 chr7:29874322-29874323(+) m6A 5'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WIPF3	Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: WIPF3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg