Basic Information:

  VIRBase ID:  

VHID00239362

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          PAIP2B:  NM_020459     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	PAIP2B
miRBase Accession/Entrez ID	MIMAT0001584	400961
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PAIP2B	chr2:71429622(-) A-I      NonSyn:Glu->Gly chr2:71429564(-) A-I      intronic chr2:71429573(-) A-I      intronic chr2:71429579(-) A-I      intronic chr2:71429575(-) A-I      intronic chr2:71429578(-) A-I      intronic chr2:71429563(-) A-I      intronic chr2:71438284(-) A-I      intronic chr2:71445082(-) A-I      intronic chr2:71445098(-) A-I      intronic chr2:71427637(-) A-I      intronic chr2:71450659(-) A-I      intronic chr2:71412570(-) A-I      3'UTR chr2:71412598(-) A-I      3'UTR chr2:71444500(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PAIP2B	chr2:71409910-71409911(-) m6A 3'UTR       27773535 chr2:71409982-71409983(-) m6A 3'UTR       27773535 chr2:71409995-71409996(-) m6A 3'UTR       27773535 chr2:71415586-71415587(-) m6A 3'UTR       24981863//27773535//27371828 chr2:71415648-71415649(-) m6A CDS       27773535//27371828 chr2:71417013-71417014(-) m6A CDS       27773535//27371828 chr2:71417037-71417038(-) m6A CDS       27371828 chr2:71417056-71417057(-) m6A CDS       27371828 chr2:71417077-71417078(-) m6A CDS       24209618//27371828 chr2:71417083-71417084(-) m6A CDS       24209618//27371828 chr2:71417116-71417117(-) m6A CDS       24209618//24981863//27773535//27371828 chr2:71417125-71417126(-) m6A CDS       24209618//24981863//27773535//27371828 chr2:71417139-71417140(-) m6A CDS       24209618//24981863//27773535//27371828 chr2:71429584-71429585(-) m6A CDS       24209618//24981863//27773535//27371828 chr2:71429633-71429634(-) m6A CDS       24209618//24981863//27773535 chr2:71429666-71429667(-) m6A CDS       24209618//24981863//27773535 chr2:71454150-71454151(-) m6A 5'UTR       24209618//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PAIP2B	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: PAIP2B

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg