Basic Information:

  VIRBase ID:  

VHID00239340

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          NOTCH2NLA:  NM_001364006     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	NOTCH2NLA
miRBase Accession/Entrez ID	MIMAT0001584	388677
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	N2N//NOTCH2NL

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NOTCH2NLA	chr1:145230950(+) A-I      intronic chr1:145230949(+) A-I      intronic chr1:145255536(+) A-I      intronic chr1:145230918(+) A-I      intronic chr1:145280771(+) A-I      intronic chr1:145231198(+) A-I      intronic chr1:145255589(+) A-I      intronic chr1:145230787(+) A-I      intronic chr1:145231185(+) A-I      intronic chr1:145230790(+) A-I      intronic chr1:145231017(+) A-I      intronic chr1:145230897(+) A-I      intronic chr1:145231201(+) A-I      intronic chr1:145230959(+) A-I      intronic chr1:145230931(+) A-I      intronic chr1:145230782(+) A-I      intronic chr1:145251702(+) A-I      intronic chr1:145230781(+) A-I      intronic chr1:145266873(+) A-I      intronic chr1:145266864(+) A-I      intronic chr1:145266851(+) A-I      intronic chr1:145230923(+) A-I      intronic chr1:145230173(+) A-I      intronic chr1:145273789(+) A-I      intronic chr1:145230856(+) A-I      intronic chr1:145230891(+) A-I      intronic chr1:145230993(+) A-I      intronic chr1:145280730(+) A-I      intronic chr1:145230944(+) A-I      intronic chr1:145266846(+) A-I      intronic chr1:145280731(+) A-I      intronic chr1:145231160(+) A-I      intronic chr1:145230834(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NOTCH2NLA	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: NOTCH2NLA

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg