Basic Information:

  VIRBase ID:  

VHID00239292

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          SOWAHB:  NM_001029870     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	SOWAHB
miRBase Accession/Entrez ID	MIMAT0001584	345079
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANKRD56

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SOWAHB	chr4:77816407-77816408(-) m6A 3'UTR       25456834//27773535 chr4:77816413-77816414(-) m6A 3'UTR       25456834//27773535 chr4:77816430-77816431(-) m6A 3'UTR       25456834//27773535 chr4:77816466-77816467(-) m6A 3'UTR       25456834//27773535 chr4:77816724-77816725(-) m6A CDS       27773535 chr4:77816900-77816901(-) m6A CDS       27773535 chr4:77817056-77817057(-) m6A CDS       25456834//24981863//27773535 chr4:77817082-77817083(-) m6A CDS       25456834//24981863//27773535 chr4:77817122-77817123(-) m6A CDS       25456834//24981863//27773535 chr4:77817146-77817147(-) m6A CDS       25456834//24981863//27773535 chr4:77817162-77817163(-) m6A CDS       25456834//24981863//27773535 chr4:77817255-77817256(-) m6A CDS       25456834//24981863//27773535 chr4:77817717-77817718(-) m6A CDS       25456834//27773535 chr4:77817761-77817762(-) m6A CDS       25456834//27773535 chr4:77817806-77817807(-) m6A CDS       25456834//27773535 chr4:77817875-77817876(-) m6A CDS       25456834//24981863//27773535 chr4:77817944-77817945(-) m6A CDS       25456834//27773535 chr4:77818394-77818395(-) m6A CDS       27773536 chr4:77818498-77818499(-) m6A CDS       27773536 chr4:77818561-77818562(-) m6A CDS       27773536 chr4:77818766-77818767(-) m6A CDS       27773536 chr4:77818811-77818812(-) m6A CDS       27773536 chr4:77818895-77818896(-) m6A CDS       25456834//27773536 chr4:77818967-77818968(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SOWAHB	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: SOWAHB

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg