Basic Information:

  VIRBase ID:  

VHID00238752

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          TIGD5:  NM_032862     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	TIGD5
miRBase Accession/Entrez ID	MIMAT0001584	84948
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TIGD5	chr8:144680251-144680252(+) m6A CDS       25456834//24981863//22608085 chr8:144680851-144680852(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr8:144680917-144680918(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr8:144680968-144680969(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr8:144680998-144680999(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr8:144681190-144681191(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr8:144681252-144681253(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr8:144681350-144681351(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681412-144681413(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681439-144681440(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681469-144681470(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681547-144681548(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681819-144681820(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681861-144681862(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681883-144681884(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144681889-144681890(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr8:144682049-144682050(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr8:144682277-144682278(+) m6A 3'UTR       24284625 chr8:144682361-144682362(+) m6A 3'UTR       24284625 chr8:144682785-144682786(+) m6A 3'UTR       - chr8:144682904-144682905(+) m6A 3'UTR       - chr8:144682924-144682925(+) m6A 3'UTR       - chr8:144683558-144683559(+) m6A 3'UTR       25456834//24981863//22608085 chr8:144683589-144683590(+) m6A 3'UTR       25456834//24981863//22608085 chr8:144683636-144683637(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TIGD5	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: TIGD5

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg