Basic Information:

  VIRBase ID:  

VHID00238624

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          LNPK:  NM_001305009     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	LNPK
miRBase Accession/Entrez ID	MIMAT0001584	80856
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA1715//LNP//LNP1//NEDEHCC//Ul//ulnaless

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LNPK	chr2:176816566(-) A-I      intronic chr2:176790487(-) A-I      3'UTR chr2:176860646(-) A-I      intronic chr2:176816567(-) A-I      intronic chr2:176790469(-) A-I      3'UTR chr2:176790450(-) A-I      3'UTR chr2:176790440(-) A-I      3'UTR chr2:176816571(-) A-I      intronic chr2:176860665(-) A-I      intronic chr2:176816559(-) A-I      intronic chr2:176860673(-) A-I      intronic chr2:176860685(-) A-I      intronic chr2:176790431(-) A-I      3'UTR chr2:176850224(-) A-I      intronic chr2:176850191(-) A-I      intronic chr2:176790427(-) A-I      3'UTR chr2:176789507(-) A-I      3'UTR chr2:176850185(-) A-I      intronic chr2:176850184(-) A-I      intronic chr2:176860695(-) A-I      intronic chr2:176850220(-) A-I      intronic chr2:176850186(-) A-I      intronic chr2:176850221(-) A-I      intronic chr2:176860625(-) A-I      intronic chr2:176810147(-) A-I      intronic chr2:176809840(-) A-I      intronic chr2:176809820(-) A-I      intronic chr2:176809809(-) A-I      intronic chr2:176809802(-) A-I      intronic chr2:176848210(-) A-I      intronic chr2:176809798(-) A-I      intronic chr2:176809797(-) A-I      intronic chr2:176789473(-) A-I      3'UTR chr2:176791158(-) A-I      3'UTR chr2:176850201(-) A-I      intronic chr2:176850225(-) A-I      intronic chr2:176860627(-) A-I      intronic chr2:176860639(-) A-I      intronic chr2:176816562(-) A-I      intronic chr2:176790501(-) A-I      3'UTR chr2:176790490(-) A-I      3'UTR chr2:176791207(-) A-I      3'UTR chr2:176791216(-) A-I      3'UTR chr2:176791220(-) A-I      3'UTR chr2:176864767(-) A-I      intronic chr2:176863050(-) A-I      intronic chr2:176862915(-) A-I      intronic chr2:176862646(-) A-I      intronic chr2:176862561(-) A-I      intronic chr2:176860740(-) A-I      intronic chr2:176860573(-) A-I      intronic chr2:176858421(-) A-I      intronic chr2:176858396(-) A-I      intronic chr2:176853770(-) A-I      intronic chr2:176853740(-) A-I      intronic chr2:176853732(-) A-I      intronic chr2:176853708(-) A-I      intronic chr2:176853701(-) A-I      intronic chr2:176853670(-) A-I      intronic chr2:176852951(-) A-I      intronic chr2:176845535(-) A-I      intronic chr2:176845526(-) A-I      intronic chr2:176845443(-) A-I      intronic chr2:176836915(-) A-I      intronic chr2:176836895(-) A-I      intronic chr2:176833614(-) A-I      intronic chr2:176810121(-) A-I      intronic chr2:176810109(-) A-I      intronic chr2:176810098(-) A-I      intronic chr2:176810085(-) A-I      intronic chr2:176810076(-) A-I      intronic chr2:176809908(-) A-I      intronic chr2:176809869(-) A-I      intronic chr2:176809748(-) A-I      intronic chr2:176864766(-) A-I      intronic chr2:176863085(-) A-I      intronic chr2:176863084(-) A-I      intronic chr2:176809738(-) A-I      intronic chr2:176809791(-) A-I      intronic chr2:176810146(-) A-I      intronic chr2:176853128(-) A-I      intronic chr2:176853201(-) A-I      intronic chr2:176809900(-) A-I      intronic chr2:176853158(-) A-I      intronic chr2:176810101(-) A-I      intronic chr2:176809755(-) A-I      intronic chr2:176830930(-) A-I      intronic chr2:176809899(-) A-I      intronic chr2:176859343(-) A-I      intronic chr2:176810070(-) A-I      intronic chr2:176809806(-) A-I      intronic chr2:176810111(-) A-I      intronic chr2:176830970(-) A-I      intronic chr2:176852973(-) A-I      intronic chr2:176809723(-) A-I      intronic chr2:176858434(-) A-I      intronic chr2:176853598(-) A-I      intronic chr2:176853599(-) A-I      intronic chr2:176810084(-) A-I      intronic chr2:176809979(-) A-I      intronic chr2:176862536(-) A-I      intronic chr2:176809805(-) A-I      intronic chr2:176859828(-) A-I      intronic chr2:176810133(-) A-I      intronic chr2:176862531(-) A-I      intronic chr2:176809845(-) A-I      intronic chr2:176833597(-) A-I      intronic chr2:176809804(-) A-I      intronic chr2:176809724(-) A-I      intronic chr2:176810171(-) A-I      intronic chr2:176809981(-) A-I      intronic chr2:176809993(-) A-I      intronic chr2:176809732(-) A-I      intronic chr2:176810170(-) A-I      intronic chr2:176860679(-) A-I      intronic chr2:176836732(-) A-I      intronic chr2:176810095(-) A-I      intronic chr2:176853775(-) A-I      intronic chr2:176863007(-) A-I      intronic chr2:176809883(-) A-I      intronic chr2:176862746(-) A-I      intronic chr2:176859827(-) A-I      intronic chr2:176852985(-) A-I      intronic chr2:176810008(-) A-I      intronic chr2:176862634(-) A-I      intronic chr2:176862682(-) A-I      intronic chr2:176853091(-) A-I      intronic chr2:176810035(-) A-I      intronic chr2:176809994(-) A-I      intronic chr2:176853157(-) A-I      intronic chr2:176798690(-) A-I      intronic chr2:176810046(-) A-I      intronic chr2:176858312(-) A-I      intronic chr2:176810151(-) A-I      intronic chr2:176853737(-) A-I      intronic chr2:176809705(-) A-I      intronic chr2:176809800(-) A-I      intronic chr2:176810150(-) A-I      intronic chr2:176845513(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LNPK	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: LNPK

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg