Detail Information

Basic Information:


  VIRBase ID:  

VHID00238447

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:           XPO4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US33-5p XPO4
miRBase
Accession/Entrez ID		 MIMAT0001584 64328
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - exp4

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR XPO4
chr13:21413433(-) A-I      intronic
chr13:21413434(-) A-I      intronic
chr13:21359175(-) A-I      intronic
chr13:21413461(-) A-I      intronic
chr13:21413431(-) A-I      intronic
chr13:21413341(-) A-I      intronic
chr13:21385620(-) A-I      intronic
chr13:21411232(-) A-I      intronic
chr13:21413091(-) A-I      intronic
chr13:21367043(-) A-I      intronic
chr13:21436092(-) A-I      intronic
chr13:21467808(-) A-I      intronic
chr13:21461888(-) A-I      intronic
chr13:21414381(-) A-I      intronic
chr13:21393140(-) A-I      intronic
chr13:21414425(-) A-I      intronic
chr13:21411621(-) A-I      intronic
chr13:21466293(-) A-I      intronic
chr13:21393251(-) A-I      intronic
chr13:21411641(-) A-I      intronic
chr13:21393687(-) A-I      intronic
chr13:21393702(-) A-I      intronic
chr13:21393725(-) A-I      intronic
chr13:21393755(-) A-I      intronic
chr13:21403300(-) A-I      intronic
chr13:21456081(-) A-I      intronic
chr13:21403369(-) A-I      intronic
chr13:21385700(-) A-I      intronic
chr13:21455682(-) A-I      intronic
chr13:21403370(-) A-I      intronic
chr13:21385551(-) A-I      intronic
chr13:21409017(-) A-I      intronic
chr13:21403372(-) A-I      intronic
chr13:21408650(-) A-I      intronic
chr13:21409068(-) A-I      intronic
chr13:21393699(-) A-I      intronic
chr13:21454975(-) A-I      intronic
chr13:21359782(-) A-I      intronic
chr13:21455580(-) A-I      intronic
chr13:21455610(-) A-I      intronic
chr13:21445074(-) A-I      intronic
chr13:21445061(-) A-I      intronic
chr13:21413146(-) A-I      intronic
chr13:21445052(-) A-I      intronic
chr13:21474344(-) A-I      intronic
chr13:21456173(-) A-I      intronic
chr13:21393056(-) A-I      intronic
chr13:21414479(-) A-I      intronic
chr13:21444987(-) A-I      intronic
chr13:21464703(-) A-I      intronic
chr13:21413879(-) A-I      intronic
chr13:21458397(-) A-I      intronic
chr13:21456162(-) A-I      intronic
chr13:21413877(-) A-I      intronic
chr13:21413340(-) A-I      intronic
chr13:21413303(-) A-I      intronic
chr13:21413758(-) A-I      intronic
chr13:21456166(-) A-I      intronic
chr13:21413186(-) A-I      intronic
chr13:21413185(-) A-I      intronic
chr13:21413181(-) A-I      intronic
chr13:21413159(-) A-I      intronic
chr13:21456167(-) A-I      intronic
chr13:21393129(-) A-I      intronic
chr13:21393137(-) A-I      intronic
chr13:21359176(-) A-I      intronic
chr13:21455528(-) A-I      intronic
chr13:21462573(-) A-I      intronic
chr13:21466989(-) A-I      intronic
chr13:21458164(-) A-I      intronic
chr13:21393144(-) A-I      intronic
chr13:21458402(-) A-I      intronic
chr13:21403313(-) A-I      intronic
chr13:21458475(-) A-I      intronic
chr13:21393155(-) A-I      intronic
chr13:21393607(-) A-I      intronic
chr13:21458906(-) A-I      intronic
chr13:21474837(-) A-I      intronic
chr13:21366626(-) A-I      intronic
chr13:21412559(-) A-I      intronic
chr13:21367091(-) A-I      intronic
chr13:21458921(-) A-I      intronic
chr13:21466363(-) A-I      intronic
chr13:21393550(-) A-I      intronic
chr13:21459118(-) A-I      intronic
chr13:21459255(-) A-I      intronic
chr13:21461749(-) A-I      intronic
chr13:21393677(-) A-I      intronic
chr13:21435611(-) A-I      intronic
chr13:21461750(-) A-I      intronic
chr13:21393074(-) A-I      intronic
chr13:21468871(-) A-I      intronic
chr13:21455579(-) A-I      intronic
chr13:21461821(-) A-I      intronic
chr13:21461878(-) A-I      intronic
chr13:21474379(-) A-I      intronic
chr13:21458045(-) A-I      intronic
chr13:21393051(-) A-I      intronic
chr13:21412821(-) A-I      intronic
chr13:21461881(-) A-I      intronic
chr13:21461891(-) A-I      intronic
chr13:21409227(-) A-I      intronic
chr13:21436101(-) A-I      intronic
chr13:21461892(-) A-I      intronic
chr13:21464359(-) A-I      intronic
chr13:21393680(-) A-I      intronic
chr13:21464477(-) A-I      intronic
chr13:21411683(-) A-I      intronic
chr13:21445015(-) A-I      intronic
chr13:21465878(-) A-I      intronic
chr13:21466339(-) A-I      intronic
chr13:21466382(-) A-I      intronic
chr13:21413376(-) A-I      intronic
chr13:21466396(-) A-I      intronic
chr13:21359171(-) A-I      intronic
chr13:21466404(-) A-I      intronic
chr13:21358998(-) A-I      intronic
chr13:21358863(-) A-I      intronic
chr13:21458172(-) A-I      intronic
chr13:21359186(-) A-I      intronic
chr13:21359258(-) A-I      intronic
chr13:21455095(-) A-I      intronic
chr13:21386361(-) A-I      intronic
chr13:21466420(-) A-I      intronic
chr13:21466439(-) A-I      intronic
chr13:21408598(-) A-I      intronic
chr13:21386342(-) A-I      intronic
chr13:21466491(-) A-I      intronic
chr13:21468094(-) A-I      intronic
chr13:21468248(-) A-I      intronic
chr13:21468254(-) A-I      intronic
chr13:21469128(-) A-I      intronic
chr13:21469526(-) A-I      intronic
chr13:21472071(-) A-I      intronic
chr13:21366368(-) A-I      intronic
chr13:21367047(-) A-I      intronic
chr13:21472164(-) A-I      intronic
chr13:21358933(-) A-I      intronic
chr13:21472171(-) A-I      intronic
chr13:21472524(-) A-I      intronic
chr13:21472538(-) A-I      intronic
chr13:21386298(-) A-I      intronic
chr13:21358960(-) A-I      intronic
chr13:21472587(-) A-I      intronic
chr13:21386318(-) A-I      intronic
chr13:21468150(-) A-I      intronic
chr13:21472621(-) A-I      intronic
chr13:21359183(-) A-I      intronic
chr13:21359629(-) A-I      intronic
chr13:21472641(-) A-I      intronic
chr13:21413255(-) A-I      intronic
chr13:21386288(-) A-I      intronic
chr13:21359632(-) A-I      intronic
chr13:21367122(-) A-I      intronic
chr13:21458263(-) A-I      intronic
chr13:21367162(-) A-I      intronic
chr13:21472652(-) A-I      intronic
chr13:21367748(-) A-I      intronic
chr13:21472678(-) A-I      intronic
chr13:21359109(-) A-I      intronic
chr13:21474360(-) A-I      intronic
chr13:21474440(-) A-I      intronic
chr13:21385722(-) A-I      intronic
chr13:21472141(-) A-I      intronic
chr13:21367786(-) A-I      intronic
chr13:21385565(-) A-I      intronic
chr13:21385591(-) A-I      intronic
chr13:21413144(-) A-I      intronic
chr13:21412705(-) A-I      intronic
chr13:21455091(-) A-I      intronic
chr13:21456127(-) A-I      intronic
chr13:21412673(-) A-I      intronic
chr13:21435599(-) A-I      intronic
chr13:21386362(-) A-I      intronic
chr13:21386347(-) A-I      intronic
chr13:21412649(-) A-I      intronic
chr13:21412689(-) A-I      intronic
chr13:21412627(-) A-I      intronic
chr13:21393124(-) A-I      intronic
chr13:21385515(-) A-I      intronic
chr13:21412625(-) A-I      intronic
chr13:21412535(-) A-I      intronic
chr13:21461759(-) A-I      intronic
chr13:21409255(-) A-I      intronic
chr13:21472138(-) A-I      intronic
chr13:21458459(-) A-I      intronic
chr13:21409222(-) A-I      intronic
chr13:21472617(-) A-I      intronic
chr13:21410837(-) A-I      intronic
chr13:21359239(-) A-I      intronic
chr13:21462769(-) A-I      intronic
chr13:21468121(-) A-I      intronic
chr13:21367790(-) A-I      intronic
chr13:21385606(-) A-I      intronic
chr13:21458124(-) A-I      intronic
chr13:21410863(-) A-I      intronic
chr13:21445114(-) A-I      intronic
chr13:21411676(-) A-I      intronic
chr13:21411195(-) A-I      intronic
chr13:21366355(-) A-I      intronic
chr13:21359145(-) A-I      intronic
chr13:21414546(-) A-I      intronic
chr13:21411122(-) A-I      intronic
chr13:21410865(-) A-I      intronic
chr13:21403316(-) A-I      intronic
chr13:21429482(-) A-I      intronic
chr13:21393158(-) A-I      intronic
chr13:21358902(-) A-I      intronic
chr13:21410871(-) A-I      intronic
chr13:21468088(-) A-I      intronic
chr13:21366764(-) A-I      intronic
chr13:21461731(-) A-I      intronic
chr13:21385603(-) A-I      intronic
chr13:21386344(-) A-I      intronic
chr13:21414462(-) A-I      intronic
chr13:21366625(-) A-I      intronic
chr13:21472129(-) A-I      intronic
chr13:21458419(-) A-I      intronic
chr13:21367831(-) A-I      intronic
chr13:21413978(-) A-I      intronic
chr13:21458044(-) A-I      intronic
chr13:21474970(-) A-I      intronic
chr13:21436056(-) A-I      intronic
chr13:21366438(-) A-I      intronic
chr13:21393057(-) A-I      intronic
chr13:21413436(-) A-I      intronic
chr13:21474352(-) A-I      intronic
chr13:21359785(-) A-I      intronic
chr13:21436694(-) A-I      intronic
chr13:21431677(-) A-I      intronic
chr13:21461100(-) A-I      intronic
chr13:21410992(-) A-I      intronic
chr13:21358942(-) A-I      intronic
chr13:21436060(-) A-I      intronic
chr13:21385706(-) A-I      intronic
chr13:21464995(-) A-I      intronic
chr13:21466458(-) A-I      intronic
chr13:21465916(-) A-I      intronic
chr13:21461837(-) A-I      intronic
chr13:21445431(-) A-I      intronic
chr13:21409018(-) A-I      intronic
chr13:21385673(-) A-I      intronic
chr13:21393071(-) A-I      intronic
chr13:21386434(-) A-I      intronic
chr13:21393575(-) A-I      intronic
chr13:21358999(-) A-I      intronic
chr13:21413719(-) A-I      intronic
chr13:21366821(-) A-I      intronic
chr13:21359231(-) A-I      intronic
chr13:21444769(-) A-I      intronic
chr13:21409067(-) A-I      intronic
chr13:21459229(-) A-I      intronic
chr13:21460629(-) A-I      intronic
chr13:21366600(-) A-I      intronic
chr13:21468213(-) A-I      intronic
chr13:21366646(-) A-I      intronic
chr13:21445146(-) A-I      intronic
chr13:21472694(-) A-I      intronic
chr13:21465872(-) A-I      intronic
chr13:21409063(-) A-I      intronic
chr13:21461996(-) A-I      intronic
chr13:21469520(-) A-I      intronic
chr13:21436754(-) A-I      intronic
chr13:21462614(-) A-I      intronic
chr13:21366827(-) A-I      intronic
chr13:21385699(-) A-I      intronic
chr13:21409226(-) A-I      intronic
chr13:21466350(-) A-I      intronic
chr13:21459230(-) A-I      intronic
chr13:21466451(-) A-I      intronic
chr13:21465745(-) A-I      intronic
chr13:21393136(-) A-I      intronic
chr13:21366419(-) A-I      intronic
chr13:21458257(-) A-I      intronic
chr13:21414429(-) A-I      intronic
chr13:21468085(-) A-I      intronic
chr13:21459277(-) A-I      intronic
chr13:21458919(-) A-I      intronic
chr13:21380681(-) A-I      intronic
chr13:21409055(-) A-I      intronic
chr13:21414516(-) A-I      intronic
chr13:21413220(-) A-I      intronic
chr13:21393619(-) A-I      intronic
chr13:21425753(-) A-I      intronic
chr13:21367096(-) A-I      intronic
chr13:21462148(-) A-I      intronic
chr13:21474423(-) A-I      intronic
chr13:21458296(-) A-I      intronic
chr13:21359594(-) A-I      intronic
chr13:21445129(-) A-I      intronic
chr13:21472119(-) A-I      intronic
chr13:21358927(-) A-I      intronic
chr13:21460746(-) A-I      intronic
chr13:21393651(-) A-I      intronic
chr13:21367097(-) A-I      intronic
chr13:21385604(-) A-I      intronic
chr13:21474866(-) A-I      intronic
chr13:21472024(-) A-I      intronic
chr13:21414506(-) A-I      intronic
chr13:21471989(-) A-I      intronic
chr13:21468146(-) A-I      intronic
chr13:21444786(-) A-I      intronic
chr13:21393723(-) A-I      intronic
chr13:21413967(-) A-I      intronic
chr13:21468151(-) A-I      intronic
chr13:21413237(-) A-I      intronic
chr13:21472507(-) A-I      intronic
chr13:21366475(-) A-I      intronic
chr13:21469114(-) A-I      intronic
chr13:21412813(-) A-I      intronic
chr13:21358865(-) A-I      intronic
chr13:21467747(-) A-I      intronic
chr13:21385609(-) A-I      intronic
chr13:21469655(-) A-I      intronic
chr13:21358934(-) A-I      intronic
chr13:21431699(-) A-I      intronic
chr13:21359560(-) A-I      intronic
chr13:21461814(-) A-I      intronic
chr13:21359131(-) A-I      intronic
chr13:21359118(-) A-I      intronic
chr13:21461956(-) A-I      intronic
chr13:21414059(-) A-I      intronic
chr13:21366437(-) A-I      intronic
chr13:21386280(-) A-I      intronic
chr13:21413240(-) A-I      intronic
chr13:21392991(-) A-I      intronic
chr13:21366798(-) A-I      intronic
chr13:21413294(-) A-I      intronic
chr13:21468260(-) A-I      intronic
chr13:21468253(-) A-I      intronic
chr13:21461791(-) A-I      intronic
chr13:21366774(-) A-I      intronic
chr13:21359554(-) A-I      intronic
chr13:21386427(-) A-I      intronic
chr13:21465751(-) A-I      intronic
chr13:21435573(-) A-I      intronic
chr13:21358864(-) A-I      intronic
chr13:21393797(-) A-I      intronic
chr13:21458142(-) A-I      intronic
chr13:21413731(-) A-I      intronic
chr13:21366608(-) A-I      intronic
chr13:21425780(-) A-I      intronic
chr13:21386293(-) A-I      intronic
chr13:21435586(-) A-I      intronic
chr13:21458403(-) A-I      intronic
chr13:21412853(-) A-I      intronic
chr13:21469662(-) A-I      intronic
chr13:21412868(-) A-I      intronic
chr13:21445047(-) A-I      intronic
chr13:21414380(-) A-I      intronic
chr13:21474383(-) A-I      intronic
chr13:21444787(-) A-I      intronic
chr13:21447875(-) A-I      intronic
chr13:21444176(-) A-I      intronic
chr13:21474341(-) A-I      intronic
chr13:21462528(-) A-I      intronic
chr13:21393716(-) A-I      intronic
chr13:21367734(-) A-I      intronic
chr13:21462572(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED XPO4
chr13:21411122(-) A-I intron -    22327324
chr13:21388899(-) A-I intron -    21960545
chr13:21440641(-) A-I intron -    21960545
chr13:21440658(-) A-I intron -    21960545
chr13:21355553(-) G-A exon 3'UTR    21725310
chr13:21410837(-) A-G intron -    22484847
chr13:21410871(-) A-G intron -    22484847
chr13:21411122(-) A-G intron -    22484847
chr13:21411195(-) A-G intron -    22484847
chr13:21366368(-) A-G intron -    22484847
chr13:21366419(-) A-G intron -    22484847
chr13:21386280(-) A-G intron -    22484847
chr13:21409067(-) A-G intron -    22484847
chr13:21411621(-) A-G intron -    22484847
chr13:21411641(-) A-G intron -    22484847
chr13:21411683(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase XPO4
chr13:21351632-21351633(-) m6A 3'UTR       27773535
chr13:21355641-21355642(-) Y 3'UTR       26075521
chr13:21356845-21356846(-) Y 3'UTR       26075521
chr13:21357709-21357710(-) m6A 3'UTR       24981863//27773535//22608085
chr13:21357736-21357737(-) m6A 3'UTR       24981863//27773535//22608085
chr13:21357851-21357852(-) m6A 3'UTR       24981863//27773535//22608085
chr13:21357859-21357860(-) m6A 3'UTR       24981863//27773535//22608085
chr13:21358011-21358012(-) m6A CDS       24284625
chr13:21358033-21358034(-) m6A CDS       24284625
chr13:21370923-21370924(-) m6A CDS       26404942
chr13:21370967-21370968(-) m6A CDS       24981863
chr13:21371020-21371021(-) m6A CDS       24981863
chr13:21442813-21442814(-) m6A CDS//exon       24981863
chr13:21476879-21476880(-) m6A 5'UTR//exon       24981863
chr13:21477019-21477020(-) m6A exon       27773536
chr13:21477037-21477038(-) m6A exon       27773536
chr13:21477127-21477128(-) m6A exon       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate XPO4
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US33-5p
Interactor2: XPO4

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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