Basic Information:

  VIRBase ID:  

VHID00238424

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          GUF1:  NM_021927     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	GUF1
miRBase Accession/Entrez ID	MIMAT0001584	60558
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DEE40//EF-4//EF4//EIEE40

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GUF1	chr4:44700150(+) A-I      intronic chr4:44700075(+) A-I      intronic chr4:44701381(+) A-I      3'UTR chr4:44701384(+) A-I      3'UTR chr4:44701312(+) A-I      3'UTR chr4:44701442(+) A-I      3'UTR chr4:44700156(+) A-I      intronic chr4:44700004(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GUF1	chr4:44700001(+) G-A intron -    22484847 chr4:44701384(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GUF1	chr4:44702537-44702538(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GUF1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: GUF1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg