Basic Information:

  VIRBase ID:  

VHID00236869

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-5p:  MIMAT0001584          IL1R1:  NM_001320981     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-5p	IL1R1
miRBase Accession/Entrez ID	MIMAT0001584	3554
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD121A//D2S1473//IL-1R-alpha//IL1R//IL1RA//P80

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IL1R1	chr2:102793548(+) A-I      3'UTR chr2:102793509(+) A-I      3'UTR chr2:102793567(+) A-I      3'UTR chr2:102793573(+) A-I      3'UTR chr2:102793575(+) A-I      3'UTR chr2:102793535(+) A-I      3'UTR chr2:102793540(+) A-I      3'UTR chr2:102793542(+) A-I      3'UTR chr2:102787460(+) A-I      intronic chr2:102787446(+) A-I      intronic chr2:102787498(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IL1R1	chr2:102686953-102686954(+) m6A 5'UTR//intron       24981863 chr2:102721072-102721073(+) m6A 5'UTR//intron       24981863 chr2:102721154-102721155(+) m6A 5'UTR//intron       24981863 chr2:102791951-102791952(+) m6A 3'UTR//CDS//intron       24981863 chr2:102791981-102791982(+) m6A 3'UTR//CDS//intron       24981863 chr2:102792052-102792053(+) m6A 3'UTR//CDS//intron       24981863 chr2:102792812-102792813(+) m6A 3'UTR//CDS//intron       24981863 chr2:102792855-102792856(+) m6A 3'UTR//CDS//intron       24981863 chr2:102792880-102792881(+) m6A 3'UTR//CDS//intron       24981863 chr2:102792992-102792993(+) m6A 3'UTR//CDS//intron       24981863 chr2:102793035-102793036(+) m6A 3'UTR//CDS//intron       24981863 chr2:102793061-102793062(+) m6A 3'UTR//CDS//intron       24981863 chr2:102793074-102793075(+) m6A 3'UTR//CDS//intron       24981863 chr2:102793090-102793091(+) m6A 3'UTR//CDS//intron       24981863//26404942 chr2:102793152-102793153(+) m6A 3'UTR//CDS//intron       24981863//26404942 chr2:102793185-102793186(+) m6A 3'UTR//CDS//intron       24981863 chr2:102793761-102793762(+) m6A 3'UTR       24981863 chr2:102793783-102793784(+) m6A 3'UTR       24981863 chr2:102793790-102793791(+) m6A 3'UTR       24981863 chr2:102793885-102793886(+) m6A 3'UTR       24981863 chr2:102793945-102793946(+) m6A 3'UTR       24981863 chr2:102793970-102793971(+) m6A 3'UTR       24981863 chr2:102793985-102793986(+) m6A 3'UTR       24981863 chr2:102795787-102795788(+) m6A 3'UTR       24981863//26404942//27773535 chr2:102795827-102795828(+) m6A 3'UTR       24981863//26404942 chr2:102795884-102795885(+) m6A 3'UTR       24981863 chr2:102795906-102795907(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IL1R1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-5p
Interactor2: IL1R1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg