Basic Information:

  VIRBase ID:  

VHID00236442

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          CBLN3:  NM_001039771     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	CBLN3
miRBase Accession/Entrez ID	MIMAT0001583	643866
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PRO1486

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CBLN3	chr14:24895948-24895949(-) m6A 3'UTR       27773535 chr14:24895971-24895972(-) m6A 3'UTR       27773535 chr14:24896147-24896148(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22575960 chr14:24896170-24896171(-) m6A 3'UTR       24284625//24981863//28052920//22575960 chr14:24896212-24896213(-) m6A 3'UTR       24284625//24981863//28052920//27371828//22575960 chr14:24896222-24896223(-) m6A 3'UTR       24284625//24981863//28052920//27371828//22575960 chr14:24896316-24896317(-) m6A 3'UTR       24284625//24981863//27371828//22575960 chr14:24896398-24896399(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960 chr14:24896403-24896404(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960 chr14:24896508-24896509(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960 chr14:24896590-24896591(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22575960 chr14:24896638-24896639(-) m6A 3'UTR       24284625//24981863//27371828//22575960 chr14:24896814-24896815(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr14:24896856-24896857(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr14:24896868-24896869(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr14:24896904-24896905(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr14:24896924-24896925(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr14:24896991-24896992(-) m6A 3'UTR       24284625//27371828 chr14:24897082-24897083(-) m6A CDS       - chr14:24897091-24897092(-) m6A CDS       - chr14:24897998-24897999(-) m6A CDS//intron       27371828 chr14:24898294-24898295(-) m6A 5'UTR//intron       27371828 chr14:24898312-24898313(-) m6A 5'UTR//intron       27371828 chr14:24898399-24898400(-) m6A 5'UTR//intron       27371828 chr14:24898410-24898411(-) m6A 5'UTR//intron       27371828 chr14:24898446-24898447(-) m6A 5'UTR//intron       27371828 chr14:24899984-24899985(-) m6A CDS       24284625//27371828 chr14:24900006-24900007(-) m6A CDS       24284625//27371828 chr14:24900073-24900074(-) m6A CDS       24284625//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CBLN3	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: CBLN3

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg