Detail Information

Basic Information:


  VIRBase ID:  

VHID00236312

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:           DRAXIN:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-3p DRAXIN
miRBase
Accession/Entrez ID		 MIMAT0001583 374946
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - AGPA3119//C1orf187//neucrin//UNQ3119

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DRAXIN
chr1:11783902(+) A-I      3'UTR
chr1:11781786(+) A-I      3'UTR
chr1:11781771(+) A-I      3'UTR
chr1:11783930(+) A-I      3'UTR
chr1:11783959(+) A-I      3'UTR
chr1:11781827(+) A-I      3'UTR
chr1:11781809(+) A-I      3'UTR
chr1:11781787(+) A-I      3'UTR
chr1:11783924(+) A-I      3'UTR
chr1:11783910(+) A-I      3'UTR
chr1:11785386(+) A-I      3'UTR
chr1:11782072(+) A-I      3'UTR
chr1:11782104(+) A-I      3'UTR
chr1:11783013(+) A-I      3'UTR
chr1:11783041(+) A-I      3'UTR
chr1:11785394(+) A-I      3'UTR
chr1:11781764(+) A-I      3'UTR
chr1:11783912(+) A-I      3'UTR
chr1:11782032(+) A-I      3'UTR
chr1:11780536(+) A-I      3'UTR
chr1:11781778(+) A-I      3'UTR
chr1:11781954(+) A-I      3'UTR
chr1:11782023(+) A-I      3'UTR
chr1:11782059(+) A-I      3'UTR
chr1:11783073(+) A-I      3'UTR
chr1:11783049(+) A-I      3'UTR
chr1:11781863(+) A-I      3'UTR
chr1:11783830(+) A-I      3'UTR
chr1:11785282(+) A-I      3'UTR
chr1:11785330(+) A-I      3'UTR
chr1:11785293(+) A-I      3'UTR
chr1:11783136(+) A-I      3'UTR
chr1:11783064(+) A-I      3'UTR
chr1:11781969(+) A-I      3'UTR
chr1:11780531(+) A-I      3'UTR
chr1:11785226(+) A-I      3'UTR
chr1:11778777(+) A-I      intronic
chr1:11780595(+) A-I      3'UTR
chr1:11775951(+) A-I      intronic
chr1:11776160(+) A-I      intronic
chr1:11783001(+) A-I      3'UTR
chr1:11781950(+) A-I      3'UTR
chr1:11763029(+) A-I      intronic
chr1:11783750(+) A-I      3'UTR
chr1:11778664(+) A-I      intronic
chr1:11781882(+) A-I      3'UTR
chr1:11782935(+) A-I      3'UTR
chr1:11783767(+) A-I      3'UTR
chr1:11781864(+) A-I      3'UTR
chr1:11783680(+) A-I      3'UTR
chr1:11781866(+) A-I      3'UTR
chr1:11785234(+) A-I      3'UTR
chr1:11783789(+) A-I      3'UTR
chr1:11781770(+) A-I      3'UTR
chr1:11782984(+) A-I      3'UTR
chr1:11781940(+) A-I      3'UTR
chr1:11785348(+) A-I      3'UTR
chr1:11783039(+) A-I      3'UTR
chr1:11780394(+) A-I      3'UTR
chr1:11783081(+) A-I      3'UTR
chr1:11777647(+) A-I      intronic
chr1:11781832(+) A-I      3'UTR
chr1:11776200(+) A-I      intronic
chr1:11783805(+) A-I      3'UTR
chr1:11783911(+) A-I      3'UTR
chr1:11781965(+) A-I      3'UTR
chr1:11759864(+) A-I      intronic
chr1:11783796(+) A-I      3'UTR
chr1:11781856(+) A-I      3'UTR
chr1:11783074(+) A-I      3'UTR
chr1:11785299(+) A-I      3'UTR
chr1:11782433(+) A-I      3'UTR
chr1:11783889(+) A-I      3'UTR
chr1:11777122(+) A-I      intronic
chr1:11780540(+) A-I      3'UTR
chr1:11783009(+) A-I      3'UTR
chr1:11777179(+) A-I      intronic
chr1:11785191(+) A-I      3'UTR
chr1:11777193(+) A-I      intronic
chr1:11778734(+) A-I      intronic
chr1:11785182(+) A-I      3'UTR
chr1:11782977(+) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DRAXIN
chr1:11751906-11751907(+) m6A 5'UTR       -
chr1:11766408-11766409(+) m6A CDS       -
chr1:11766421-11766422(+) m6A CDS       -
chr1:11766637-11766638(+) m6A CDS       25456834
chr1:11766643-11766644(+) m6A CDS       25456834
chr1:11766656-11766657(+) m6A CDS       25456834
chr1:11766685-11766686(+) m6A CDS       25456834
chr1:11766708-11766709(+) m6A CDS       25456834
chr1:11766745-11766746(+) m6A CDS       25456834
chr1:11779670-11779671(+) m6A CDS       25456834//24981863
chr1:11779765-11779766(+) m6A 3'UTR       25456834//24981863
chr1:11779772-11779773(+) m6A 3'UTR       25456834//24981863
chr1:11779842-11779843(+) m6A 3'UTR       25456834//24981863
chr1:11779862-11779863(+) m6A 3'UTR       25456834//24981863
chr1:11779875-11779876(+) m6A 3'UTR       25456834//24981863
chr1:11779965-11779966(+) m6A 3'UTR       25456834//24981863
chr1:11780067-11780068(+) m6A 3'UTR       24981863
chr1:11780104-11780105(+) m6A 3'UTR       24981863
chr1:11780145-11780146(+) m6A 3'UTR       24981863
chr1:11780253-11780254(+) m6A 3'UTR       25456834//24981863
chr1:11780317-11780318(+) m6A 3'UTR       25456834//24981863
chr1:11780323-11780324(+) m6A 3'UTR       25456834//24981863
chr1:11780450-11780451(+) m6A 3'UTR       25456834//24981863
chr1:11780473-11780474(+) m6A 3'UTR       25456834//24981863
chr1:11780570-11780571(+) m6A 3'UTR       25456834//24981863
chr1:11780629-11780630(+) m6A 3'UTR       25456834//24981863
chr1:11780640-11780641(+) m6A 3'UTR       25456834//24981863
chr1:11780738-11780739(+) m6A 3'UTR       25456834//24981863
chr1:11780778-11780779(+) m6A 3'UTR       25456834//24981863
chr1:11780784-11780785(+) m6A 3'UTR       25456834//24981863
chr1:11780967-11780968(+) m6A 3'UTR       25456834//24981863
chr1:11780972-11780973(+) m6A 3'UTR       25456834//24981863
chr1:11781514-11781515(+) m6A 3'UTR       25456834
chr1:11784475-11784476(+) m6A 3'UTR       25456834
chr1:11784741-11784742(+) m6A 3'UTR       25456834
chr1:11784755-11784756(+) m6A 3'UTR       25456834
chr1:11784766-11784767(+) m6A 3'UTR       25456834
chr1:11784779-11784780(+) m6A 3'UTR       25456834
chr1:11784787-11784788(+) m6A 3'UTR       25456834
chr1:11784814-11784815(+) m6A 3'UTR       25456834
chr1:11784838-11784839(+) m6A 3'UTR       25456834
chr1:11784876-11784877(+) m6A 3'UTR       25456834
chr1:11784995-11784996(+) m6A 3'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DRAXIN
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-US25-2-3p
Irinotecan       60838

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-3p
Interactor2: DRAXIN

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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