Detail Information

Basic Information:


  VIRBase ID:  

VHID00236111

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:           KIF6:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-3p KIF6
miRBase
Accession/Entrez ID		 MIMAT0001583 221458
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - C6orf102//dJ1043E3.1//dJ137F1.4//dJ188D3.1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KIF6
chr6:39657621(-) A-I      intronic
chr6:39323331(-) A-I      intronic
chr6:39657608(-) A-I      intronic
chr6:39657600(-) A-I      intronic
chr6:39657577(-) A-I      intronic
chr6:39657576(-) A-I      intronic
chr6:39323336(-) A-I      intronic
chr6:39678653(-) A-I      intronic
chr6:39657163(-) A-I      intronic
chr6:39330839(-) A-I      intronic
chr6:39647548(-) A-I      intronic
chr6:39647439(-) A-I      intronic
chr6:39657613(-) A-I      intronic
chr6:39299963(-) A-I      3'UTR
chr6:39299941(-) A-I      3'UTR
chr6:39299942(-) A-I      3'UTR
chr6:39299020(-) A-I      3'UTR
chr6:39497454(-) A-I      intronic
chr6:39656879(-) A-I      intronic
chr6:39657106(-) A-I      intronic
chr6:39314521(-) A-I      intronic
chr6:39322840(-) A-I      intronic
chr6:39657235(-) A-I      intronic
chr6:39299355(-) A-I      3'UTR
chr6:39299343(-) A-I      3'UTR
chr6:39299960(-) A-I      3'UTR
chr6:39302244(-) A-I      3'UTR
chr6:39299328(-) A-I      3'UTR
chr6:39299349(-) A-I      3'UTR
chr6:39302177(-) A-I      3'UTR
chr6:39299040(-) A-I      3'UTR
chr6:39299009(-) A-I      3'UTR
chr6:39299337(-) A-I      3'UTR
chr6:39299340(-) A-I      3'UTR
chr6:39299299(-) A-I      3'UTR
chr6:39299282(-) A-I      3'UTR
chr6:39299839(-) A-I      3'UTR
chr6:39302154(-) A-I      3'UTR
chr6:39299969(-) A-I      3'UTR
chr6:39299998(-) A-I      3'UTR
chr6:39299058(-) A-I      3'UTR
chr6:39630839(-) A-I      intronic
chr6:39657054(-) A-I      intronic
chr6:39323368(-) A-I      intronic
chr6:39330665(-) A-I      intronic
chr6:39548934(-) A-I      intronic
chr6:39552114(-) A-I      intronic
chr6:39657599(-) A-I      intronic
chr6:39317525(-) A-I      intronic
chr6:39418567(-) A-I      intronic
chr6:39418433(-) A-I      intronic
chr6:39647881(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KIF6
chr6:39304166-39304167(-) m6A 3'UTR       -
chr6:39304214-39304215(-) m6A 3'UTR       -
chr6:39311110-39311111(-) m6A intron       25456834
chr6:39311148-39311149(-) m6A CDS//intron       25456834
chr6:39311506-39311507(-) m6A CDS       25456834
chr6:39693073-39693074(-) m6A 5'UTR//CDS//exon       24209618

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KIF6
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-US25-2-3p
Irinotecan       60838

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-3p
Interactor2: KIF6

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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