Basic Information:

  VIRBase ID:  

VHID00236081

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          LVRN:  NM_173800     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	LVRN
miRBase Accession/Entrez ID	MIMAT0001583	206338
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	APQ//AQPEP//TAQPEP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LVRN	chr5:115306321(+) A-I      intronic chr5:115304153(+) A-I      intronic chr5:115305429(+) A-I      intronic chr5:115305406(+) A-I      intronic chr5:115305417(+) A-I      intronic chr5:115305476(+) A-I      intronic chr5:115306209(+) A-I      intronic chr5:115306284(+) A-I      intronic chr5:115306294(+) A-I      intronic chr5:115333159(+) A-I      intronic chr5:115305331(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LVRN	chr5:115362244-115362245(+) m6A 3'UTR//exon       27773535 chr5:115362277-115362278(+) m6A 3'UTR//exon       27773535 chr5:115362283-115362284(+) m6A 3'UTR//exon       27773535 chr5:115362308-115362309(+) m6A 3'UTR//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LVRN	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: LVRN

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg