Detail Information

Basic Information:


  VIRBase ID:  

VHID00235958

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:           BTNL9:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-3p BTNL9
miRBase
Accession/Entrez ID
MIMAT0001583 153579
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - BTN3//BTN8//VDLS1900

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BTNL9
chr5:180484155-180484156(+) m6A 3'UTR//intron       25456834//22608085
chr5:180486251-180486252(+) m6A CDS//exon       25456834//22608085
chr5:180486614-180486615(+) m6A CDS       -
chr5:180486738-180486739(+) m6A CDS       24981863//22608085
chr5:180486839-180486840(+) m6A CDS       24209618//24981863//22608085
chr5:180486851-180486852(+) m6A CDS       24209618//25456834//24981863//22608085
chr5:180486882-180486883(+) m6A 3'UTR       24209618//25456834//24981863//22608085
chr5:180486980-180486981(+) m6A 3'UTR       24209618//25456834//24981863//22608085
chr5:180486992-180486993(+) m6A 3'UTR       24209618//25456834//24981863//22608085
chr5:180487046-180487047(+) m6A 3'UTR       25456834//24981863//22608085
chr5:180487077-180487078(+) m6A 3'UTR       25456834//24981863//22608085
chr5:180487176-180487177(+) m6A 3'UTR       24981863//22608085
chr5:180487500-180487501(+) m6A 3'UTR       24981863//22608085
chr5:180487509-180487510(+) m6A 3'UTR       24981863//22608085
chr5:180487557-180487558(+) m6A 3'UTR       24981863//22608085
chr5:180487609-180487610(+) m6A 3'UTR       22608085
chr5:180487745-180487746(+) m6A 3'UTR       24981863
chr5:180487795-180487796(+) m6A 3'UTR       24981863
chr5:180487802-180487803(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BTNL9
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-US25-2-3p
Irinotecan       60838

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-3p
Interactor2: BTNL9

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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