Detail Information

Basic Information:


  VIRBase ID:  

VHID00235441

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:           CAMKK1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-3p CAMKK1
miRBase
Accession/Entrez ID		 MIMAT0001583 84254
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - CAMKKA

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CAMKK1
chr17:3777758(-) A-I      intronic
chr17:3777738(-) A-I      intronic
chr17:3777742(-) A-I      intronic
chr17:3777870(-) A-I      intronic
chr17:3777871(-) A-I      intronic
chr17:3777880(-) A-I      intronic
chr17:3777885(-) A-I      intronic
chr17:3777904(-) A-I      intronic
chr17:3777913(-) A-I      intronic
chr17:3777930(-) A-I      intronic
chr17:3778281(-) A-I      intronic
chr17:3778294(-) A-I      intronic
chr17:3778777(-) A-I      intronic
chr17:3777774(-) A-I      intronic
chr17:3767669(-) A-I      intronic
chr17:3767626(-) A-I      intronic
chr17:3766021(-) A-I      intronic
chr17:3778784(-) A-I      intronic
chr17:3778785(-) A-I      intronic
chr17:3778304(-) A-I      intronic
chr17:3778316(-) A-I      intronic
chr17:3778292(-) A-I      intronic
chr17:3766739(-) A-I      intronic
chr17:3766190(-) A-I      intronic
chr17:3777803(-) A-I      intronic
chr17:3767440(-) A-I      intronic
chr17:3766204(-) A-I      intronic
chr17:3777733(-) A-I      intronic
chr17:3765984(-) A-I      intronic
chr17:3777804(-) A-I      intronic
chr17:3782123(-) A-I      intronic
chr17:3766940(-) A-I      intronic
chr17:3767813(-) A-I      intronic
chr17:3766203(-) A-I      intronic
chr17:3766062(-) A-I      intronic
chr17:3777718(-) A-I      intronic
chr17:3767514(-) A-I      intronic
chr17:3765996(-) A-I      intronic
chr17:3766586(-) A-I      intronic
chr17:3778691(-) A-I      intronic
chr17:3777751(-) A-I      intronic
chr17:3766533(-) A-I      intronic
chr17:3766978(-) A-I      intronic
chr17:3766925(-) A-I      intronic
chr17:3766779(-) A-I      intronic
chr17:3778159(-) A-I      intronic
chr17:3766009(-) A-I      intronic
chr17:3767004(-) A-I      intronic
chr17:3766684(-) A-I      intronic
chr17:3777923(-) A-I      intronic
chr17:3777794(-) A-I      intronic
chr17:3766088(-) A-I      intronic
chr17:3778171(-) A-I      intronic
chr17:3766048(-) A-I      intronic
chr17:3766094(-) A-I      intronic
chr17:3765953(-) A-I      intronic
chr17:3766709(-) A-I      intronic
chr17:3767608(-) A-I      intronic
chr17:3777755(-) A-I      intronic
chr17:3778059(-) A-I      intronic
chr17:3778668(-) A-I      intronic
chr17:3767517(-) A-I      intronic
chr17:3765991(-) A-I      intronic
chr17:3777940(-) A-I      intronic
chr17:3767307(-) A-I      intronic
chr17:3789814(-) A-I      intronic
chr17:3766683(-) A-I      intronic
chr17:3766680(-) A-I      intronic
chr17:3766670(-) A-I      intronic
chr17:3766197(-) A-I      intronic
chr17:3767371(-) A-I      intronic
chr17:3767812(-) A-I      intronic
chr17:3777939(-) A-I      intronic
chr17:3778408(-) A-I      intronic
chr17:3766706(-) A-I      intronic
chr17:3766607(-) A-I      intronic
chr17:3778727(-) A-I      intronic
chr17:3766911(-) A-I      intronic
chr17:3766692(-) A-I      intronic
chr17:3766642(-) A-I      intronic
chr17:3766657(-) A-I      intronic
chr17:3767515(-) A-I      intronic
chr17:3766744(-) A-I      intronic
chr17:3766149(-) A-I      intronic
chr17:3777734(-) A-I      intronic
chr17:3778714(-) A-I      intronic
chr17:3767118(-) A-I      intronic
chr17:3766147(-) A-I      intronic
chr17:3766893(-) A-I      intronic
chr17:3766967(-) A-I      intronic
chr17:3766745(-) A-I      intronic
chr17:3778075(-) A-I      intronic
chr17:3765999(-) A-I      intronic
chr17:3778172(-) A-I      intronic
chr17:3767444(-) A-I      intronic
chr17:3778076(-) A-I      intronic
chr17:3766909(-) A-I      intronic
chr17:3766927(-) A-I      intronic
chr17:3767385(-) A-I      intronic
chr17:3777846(-) A-I      intronic
chr17:3766052(-) A-I      intronic
chr17:3778054(-) A-I      intronic
chr17:3765989(-) A-I      intronic
chr17:3766568(-) A-I      intronic
chr17:3777975(-) A-I      intronic
chr17:3766569(-) A-I      intronic
chr17:3778673(-) A-I      intronic
chr17:3778704(-) A-I      intronic
chr17:3771072(-) A-I      intronic
chr17:3763779(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CAMKK1
chr17:3763899-3763900(-) m6A 3'UTR       24284625
chr17:3764136-3764137(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3764215-3764216(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764225-3764226(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764239-3764240(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764245-3764246(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764360-3764361(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764408-3764409(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764466-3764467(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764473-3764474(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764503-3764504(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3764575-3764576(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3764649-3764650(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3764758-3764759(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3764793-3764794(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3764807-3764808(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3764882-3764883(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr17:3764974-3764975(-) m6A 3'UTR       24284625
chr17:3764988-3764989(-) m6A 3'UTR       24284625
chr17:3765118-3765119(-) m6A 3'UTR       24284625//25456834//27371828//27773536
chr17:3765161-3765162(-) m6A 3'UTR       24284625//25456834//27371828//27773536//22575960//22608085
chr17:3765236-3765237(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3765267-3765268(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3765337-3765338(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:3765402-3765403(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:3769179-3769180(-) m6A 3'UTR//intron       24284625
chr17:3769210-3769211(-) m6A CDS       24284625
chr17:3769264-3769265(-) m6A CDS       24284625
chr17:3772788-3772789(-) m6A CDS       24284625
chr17:3772814-3772815(-) m6A CDS       24284625
chr17:3773101-3773102(-) m6A CDS       24284625
chr17:3787704-3787705(-) m6A CDS//exon       24284625
chr17:3788801-3788802(-) m6A CDS//exon       24284625
chr17:3788853-3788854(-) m6A CDS//exon       24284625//27371828//22608085
chr17:3788998-3788999(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773536//22608085
chr17:3794030-3794031(-) m6A 5'UTR//intron       24981863
chr17:3796252-3796253(-) m6A 5'UTR//intron       24981863
chr17:3798024-3798025(-) m6A exon       24284625
chr17:3798032-3798033(-) m6A exon       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CAMKK1
Chromatin K562 cells     -
Exosome Blood     -
Nucleus Colon cancer cells     24393600
Nucleus HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-US25-2-3p
Irinotecan       60838

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-3p
Interactor2: CAMKK1

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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