Basic Information:

  VIRBase ID:  

VHID00234792

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          CMTR2:  NM_018348     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	CMTR2
miRBase Accession/Entrez ID	MIMAT0001583	55783
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AFT//FTSJD1//HMTr2//MTr2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CMTR2	chr16:71316269-71316270(-) m6A 3'UTR       27773535 chr16:71316824-71316825(-) m6A 3'UTR       27773535 chr16:71316834-71316835(-) m6A 3'UTR       27773535 chr16:71316897-71316898(-) m6A 3'UTR       27773535 chr16:71317745-71317746(-) m6A CDS       24284625 chr16:71317779-71317780(-) m6A CDS       24284625//22608085 chr16:71317940-71317941(-) m6A CDS       24284625//24209618//24981863//22608085 chr16:71318005-71318006(-) m6A CDS       24284625//24209618//24981863//22608085 chr16:71318164-71318165(-) m6A CDS       24284625//24981863//27773535//22608085 chr16:71318203-71318204(-) m6A CDS       24284625//24981863//27773535//22608085 chr16:71318271-71318272(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71318320-71318321(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71318370-71318371(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr16:71318413-71318414(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr16:71318496-71318497(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71318510-71318511(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71318590-71318591(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr16:71318656-71318657(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:71318690-71318691(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:71318703-71318704(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:71318746-71318747(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr16:71318808-71318809(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr16:71318894-71318895(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71318917-71318918(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71318948-71318949(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71318966-71318967(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71318980-71318981(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71319085-71319086(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:71319095-71319096(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:71319169-71319170(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr16:71319412-71319413(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71319496-71319497(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71319580-71319581(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr16:71319599-71319600(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr16:71319620-71319621(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71319646-71319647(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:71319725-71319726(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71319739-71319740(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71319804-71319805(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr16:71320364-71320365(-) m6A exon//intron       24284625//24209618//24981863//27773535//22608085 chr16:71320474-71320475(-) m6A exon//intron       27773535 chr16:71322053-71322054(-) m6A exon//intron       27773535 chr16:71322089-71322090(-) m6A exon//intron       27773535 chr16:71322106-71322107(-) m6A exon//intron       27773535 chr16:71322302-71322303(-) m6A exon//intron       27773535 chr16:71322309-71322310(-) m6A exon//intron       27773535 chr16:71322320-71322321(-) m6A exon//intron       27773535 chr16:71322365-71322366(-) m6A exon//intron       27773535 chr16:71322370-71322371(-) m6A exon//intron       27773535 chr16:71323067-71323068(-) m6A 5'UTR//exon//intron       27371828//27773536 chr16:71323142-71323143(-) m6A 5'UTR//exon//intron       24284625//27371828//27773536 chr16:71323156-71323157(-) m6A 5'UTR//exon//intron       24284625//27371828//27773536 chr16:71323215-71323216(-) m6A 5'UTR//exon//intron       27371828//27773536 chr16:71323248-71323249(-) m6A 5'UTR//exon//intron       24981863//27371828//27773536 chr16:71323308-71323309(-) m6A 5'UTR//exon//intron       24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CMTR2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: CMTR2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg