Basic Information:

  VIRBase ID:  

VHID00234540

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          CLIC5:  NR_045672     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	CLIC5
miRBase Accession/Entrez ID	MIMAT0001583	53405
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DFNB102//DFNB103//MST130//MSTP130

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CLIC5	chr6:45977141(-) A-I      intronic chr6:45977135(-) A-I      intronic chr6:45977108(-) A-I      intronic chr6:45977154(-) A-I      intronic chr6:45977109(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CLIC5	chr6:45941618(-) C-G intron -    22484847 chr6:45941637(-) T-A intron -    22484847 chr6:46003645(-) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CLIC5	chr6:45868987-45868988(-) m6A 3'UTR//intron       - chr6:45869054-45869055(-) m6A 3'UTR//intron       - chr6:45869068-45869069(-) m6A 3'UTR//intron       - chr6:45869169-45869170(-) m6A 3'UTR//intron       - chr6:45870231-45870232(-) m6A 3'UTR//intron       - chr6:45870249-45870250(-) m6A 3'UTR//intron       - chr6:45870305-45870306(-) m6A 3'UTR//intron       - chr6:45870322-45870323(-) m6A 3'UTR//intron       24981863 chr6:45870361-45870362(-) m6A 3'UTR//intron       24981863 chr6:45870415-45870416(-) m6A 3'UTR//intron       - chr6:45870473-45870474(-) m6A 3'UTR//intron       - chr6:45870610-45870611(-) m6A 3'UTR//intron       - chr6:45870686-45870687(-) m6A 3'UTR//exon       - chr6:45870754-45870755(-) m6A 3'UTR//exon       - chr6:45870769-45870770(-) m6A 3'UTR//exon       - chr6:45870788-45870789(-) m6A 3'UTR//exon       - chr6:45879662-45879663(-) m6A 3'UTR//intron       - chr6:45909368-45909369(-) m6A CDS       - chr6:45909380-45909381(-) m6A CDS       - chr6:45917008-45917009(-) m6A CDS       - chr6:45917044-45917045(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CLIC5	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: CLIC5

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg