Basic Information:

  VIRBase ID:  

VHID00234353

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          ACAD9:  NR_033426     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	ACAD9
miRBase Accession/Entrez ID	MIMAT0001583	28976
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MC1DN20//NPD002

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ACAD9	chr3:128621247(+) A-I      intronic chr3:128611483(+) A-I      intronic chr3:128604254(+) A-I      intronic chr3:128629944(+) A-I      intronic chr3:128629924(+) A-I      intronic chr3:128612162(+) A-I      intronic chr3:128612152(+) A-I      intronic chr3:128612072(+) A-I      intronic chr3:128605934(+) A-I      intronic chr3:128610379(+) A-I      intronic chr3:128610353(+) A-I      intronic chr3:128610343(+) A-I      intronic chr3:128605898(+) A-I      intronic chr3:128605839(+) A-I      intronic chr3:128610299(+) A-I      intronic chr3:128609896(+) A-I      intronic chr3:128609876(+) A-I      intronic chr3:128605404(+) A-I      intronic chr3:128609857(+) A-I      intronic chr3:128605904(+) A-I      intronic chr3:128609724(+) A-I      intronic chr3:128609398(+) A-I      intronic chr3:128609368(+) A-I      intronic chr3:128609313(+) A-I      intronic chr3:128609203(+) A-I      intronic chr3:128609114(+) A-I      intronic chr3:128609005(+) A-I      intronic chr3:128608874(+) A-I      intronic chr3:128608766(+) A-I      intronic chr3:128608729(+) A-I      intronic chr3:128607270(+) A-I      intronic chr3:128607144(+) A-I      intronic chr3:128605399(+) A-I      intronic chr3:128610459(+) A-I      intronic chr3:128605390(+) A-I      intronic chr3:128605376(+) A-I      intronic chr3:128605368(+) A-I      intronic chr3:128605297(+) A-I      intronic chr3:128605290(+) A-I      intronic chr3:128604763(+) A-I      intronic chr3:128604498(+) A-I      intronic chr3:128605933(+) A-I      intronic chr3:128604371(+) A-I      intronic chr3:128605886(+) A-I      intronic chr3:128605948(+) A-I      intronic chr3:128605951(+) A-I      intronic chr3:128604338(+) A-I      intronic chr3:128604257(+) A-I      intronic chr3:128604256(+) A-I      intronic chr3:128609850(+) A-I      intronic chr3:128605844(+) A-I      intronic chr3:128605206(+) A-I      intronic chr3:128604708(+) A-I      intronic chr3:128609762(+) A-I      intronic chr3:128604674(+) A-I      intronic chr3:128609001(+) A-I      intronic chr3:128606258(+) A-I      intronic chr3:128609889(+) A-I      intronic chr3:128606370(+) A-I      intronic chr3:128610317(+) A-I      intronic chr3:128608131(+) A-I      intronic chr3:128604376(+) A-I      intronic chr3:128606335(+) A-I      intronic chr3:128604439(+) A-I      intronic chr3:128609494(+) A-I      intronic chr3:128604780(+) A-I      intronic chr3:128612090(+) A-I      intronic chr3:128609867(+) A-I      intronic chr3:128610277(+) A-I      intronic chr3:128606224(+) A-I      intronic chr3:128611492(+) A-I      intronic chr3:128610186(+) A-I      intronic chr3:128606036(+) A-I      intronic chr3:128604801(+) A-I      intronic chr3:128604336(+) A-I      intronic chr3:128609290(+) A-I      intronic chr3:128611460(+) A-I      intronic chr3:128604396(+) A-I      intronic chr3:128600951(+) A-I      intronic chr3:128602384(+) A-I      intronic chr3:128604420(+) A-I      intronic chr3:128610349(+) A-I      intronic chr3:128612095(+) A-I      intronic chr3:128610344(+) A-I      intronic chr3:128605431(+) A-I      intronic chr3:128606339(+) A-I      intronic chr3:128605496(+) A-I      intronic chr3:128608782(+) A-I      intronic chr3:128607301(+) A-I      intronic chr3:128611443(+) A-I      intronic chr3:128604470(+) A-I      intronic chr3:128608852(+) A-I      intronic chr3:128608688(+) A-I      intronic chr3:128605977(+) A-I      intronic chr3:128612132(+) A-I      intronic chr3:128604258(+) A-I      intronic chr3:128608943(+) A-I      intronic chr3:128604809(+) A-I      intronic chr3:128604510(+) A-I      intronic chr3:128610384(+) A-I      intronic chr3:128607260(+) A-I      intronic chr3:128604411(+) A-I      intronic chr3:128604739(+) A-I      intronic chr3:128606291(+) A-I      intronic chr3:128604312(+) A-I      intronic chr3:128608889(+) A-I      intronic chr3:128605965(+) A-I      intronic chr3:128610226(+) A-I      intronic chr3:128604374(+) A-I      intronic chr3:128604464(+) A-I      intronic chr3:128606329(+) A-I      intronic chr3:128608921(+) A-I      intronic chr3:128607148(+) A-I      intronic chr3:128606004(+) A-I      intronic chr3:128609502(+) A-I      intronic chr3:128611391(+) A-I      intronic chr3:128605218(+) A-I      intronic chr3:128606287(+) A-I      intronic chr3:128612141(+) A-I      intronic chr3:128606194(+) A-I      intronic chr3:128605908(+) A-I      intronic chr3:128606406(+) A-I      intronic chr3:128605095(+) A-I      intronic chr3:128605913(+) A-I      intronic chr3:128604669(+) A-I      intronic chr3:128609785(+) A-I      intronic chr3:128604781(+) A-I      intronic chr3:128609109(+) A-I      intronic chr3:128604335(+) A-I      intronic chr3:128607302(+) A-I      intronic chr3:128609067(+) A-I      intronic chr3:128608798(+) A-I      intronic chr3:128612099(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ACAD9	chr3:128602294(+) G-A intron -    22484847 chr3:128604258(+) A-G intron -    22484847 chr3:128604304(+) A-G intron -    22484847 chr3:128604312(+) A-G intron -    22484847 chr3:128604336(+) A-G intron -    22484847 chr3:128604374(+) A-G intron -    22484847 chr3:128604434(+) A-G intron -    22484847 chr3:128604439(+) A-G intron -    22484847 chr3:128604464(+) A-G intron -    22484847 chr3:128604604(+) A-G intron -    22484847 chr3:128604669(+) A-G intron -    22484847 chr3:128604673(+) A-G intron -    22484847 chr3:128604674(+) A-G intron -    22484847 chr3:128604676(+) A-G intron -    22484847 chr3:128604708(+) A-G intron -    22484847 chr3:128604739(+) A-G intron -    22484847 chr3:128604740(+) A-G intron -    22484847 chr3:128605046(+) A-G intron -    22484847 chr3:128605206(+) A-G intron -    22484847 chr3:128605431(+) A-G intron -    22484847 chr3:128605503(+) A-G intron -    22484847 chr3:128605844(+) A-G intron -    22484847 chr3:128605910(+) A-G intron -    22484847 chr3:128605956(+) T-C intron -    22484847 chr3:128605965(+) A-G intron -    22484847 chr3:128605977(+) A-G intron -    22484847 chr3:128606258(+) A-G intron -    22484847 chr3:128606327(+) A-G intron -    22484847 chr3:128607148(+) A-G intron -    22484847 chr3:128607240(+) A-G intron -    22484847 chr3:128607260(+) A-G intron -    22484847 chr3:128607302(+) A-G intron -    22484847 chr3:128607322(+) C-T intron -    22484847 chr3:128608782(+) A-G intron -    22484847 chr3:128608798(+) A-G intron -    22484847 chr3:128608799(+) A-G intron -    22484847 chr3:128608826(+) A-G intron -    22484847 chr3:128608855(+) A-G intron -    22484847 chr3:128608921(+) A-G intron -    22484847 chr3:128608943(+) A-G intron -    22484847 chr3:128609001(+) A-G intron -    22484847 chr3:128609018(+) T-C intron -    22484847 chr3:128609062(+) A-G intron -    22484847 chr3:128609290(+) A-G intron -    22484847 chr3:128609291(+) A-G intron -    22484847 chr3:128609762(+) A-G intron -    22484847 chr3:128609778(+) A-G intron -    22484847 chr3:128609785(+) A-G intron -    22484847 chr3:128609824(+) A-G intron -    22484847 chr3:128609889(+) A-G intron -    22484847 chr3:128610277(+) A-G intron -    22484847 chr3:128610278(+) A-G intron -    22484847 chr3:128610344(+) A-G intron -    22484847 chr3:128610349(+) A-G intron -    22484847 chr3:128610385(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ACAD9	chr3:128598502-128598503(+) m6A 5'UTR//exon       24284625//24981863 chr3:128598522-128598523(+) m6A 5'UTR//exon       24284625//24981863 chr3:128598610-128598611(+) m6A CDS//exon       24284625 chr3:128598704-128598705(+) m6A CDS//exon//intron       24284625//22608085 chr3:128598746-128598747(+) m6A CDS//exon//intron       24284625//25456834//22608085 chr3:128598757-128598758(+) m6A CDS//exon//intron       24284625//25456834//22608085 chr3:128598776-128598777(+) m6A CDS//exon//intron       24284625//25456834//22608085 chr3:128598843-128598844(+) m6A 3'UTR//exon//intron       24284625//22608085 chr3:128598865-128598866(+) m6A exon//intron       24284625//22608085 chr3:128598883-128598884(+) m6A exon//intron       24284625//22608085 chr3:128614186-128614187(+) m6A 3'UTR//CDS       24284625 chr3:128615328-128615329(+) m6A 3'UTR//CDS       24284625 chr3:128629650-128629651(+) m6A 3'UTR//CDS//exon       24284625 chr3:128631361-128631362(+) m6A 3'UTR//CDS//exon       24284625 chr3:128631436-128631437(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr3:128631441-128631442(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr3:128631458-128631459(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//22608085 chr3:128631646-128631647(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:128631663-128631664(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:128631703-128631704(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:128631731-128631732(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:128631745-128631746(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:128631789-128631790(+) m6A 3'UTR//exon//intron       25456834//24981863//27773535//22575960//22608085 chr3:128631842-128631843(+) m6A 3'UTR//exon//intron       25456834//27773535//22608085 chr3:128631877-128631878(+) m6A 3'UTR//exon//intron       27773535 chr3:128631899-128631900(+) m6A 3'UTR//exon//intron       27773535 chr3:128631912-128631913(+) m6A 3'UTR//exon//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ACAD9	Chromatin K562 cells     - Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: ACAD9

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg