Basic Information:

  VIRBase ID:  

VHID00234327

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          FILIP1:  NR_110608     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	FILIP1
miRBase Accession/Entrez ID	MIMAT0001583	27145
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FILIP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FILIP1	chr6:76102687(-) A-I      intronic chr6:76102686(-) A-I      intronic chr6:76102660(-) A-I      intronic chr6:76102672(-) A-I      intronic chr6:76102677(-) A-I      intronic chr6:76102680(-) A-I      intronic chr6:76102685(-) A-I      intronic chr6:76062710(-) A-I      intronic chr6:76062709(-) A-I      intronic chr6:76062708(-) A-I      intronic chr6:76062705(-) A-I      intronic chr6:76062684(-) A-I      intronic chr6:76062682(-) A-I      intronic chr6:76062668(-) A-I      intronic chr6:76062665(-) A-I      intronic chr6:76062662(-) A-I      intronic chr6:76062651(-) A-I      intronic chr6:76030090(-) A-I      intronic chr6:76030912(-) A-I      intronic chr6:76081862(-) A-I      intronic chr6:76117177(-) A-I      intronic chr6:76050675(-) A-I      intronic chr6:76050549(-) A-I      intronic chr6:76049601(-) A-I      intronic chr6:76050517(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FILIP1	chr6:76003044-76003045(-) m6A 3'UTR       24981863 chr6:76003126-76003127(-) m6A 3'UTR       24981863 chr6:76005566-76005567(-) m6A 3'UTR       24981863 chr6:76005616-76005617(-) m6A 3'UTR       24981863 chr6:76005635-76005636(-) m6A CDS       24981863 chr6:76022306-76022307(-) m6A CDS//exon       24981863 chr6:76022356-76022357(-) m6A CDS//exon       24981863//27773535 chr6:76022418-76022419(-) m6A CDS//exon       25456834//24981863//27773535 chr6:76022444-76022445(-) m6A CDS//exon       25456834//24981863//27773535 chr6:76022545-76022546(-) m6A CDS//exon       24981863//27773535 chr6:76022576-76022577(-) m6A CDS//exon       24981863//27773535 chr6:76022655-76022656(-) m6A CDS//exon       27773535 chr6:76023340-76023341(-) m6A CDS//exon       24981863 chr6:76023391-76023392(-) m6A CDS//exon       24981863 chr6:76023426-76023427(-) m6A CDS//exon       24981863//27773535 chr6:76023432-76023433(-) m6A CDS//exon       24981863//27773535 chr6:76023542-76023543(-) m6A CDS//exon       24981863//27773535 chr6:76023555-76023556(-) m6A CDS//exon       24981863//27773535 chr6:76023581-76023582(-) m6A CDS//exon       24981863 chr6:76023633-76023634(-) m6A CDS//exon       24981863 chr6:76023654-76023655(-) m6A CDS//exon       24981863 chr6:76023750-76023751(-) m6A CDS//exon       24981863//27773535 chr6:76023879-76023880(-) m6A CDS//exon       24981863 chr6:76023888-76023889(-) m6A CDS//exon       24981863 chr6:76023909-76023910(-) m6A CDS//exon       24981863//27773535 chr6:76023939-76023940(-) m6A CDS//exon       24981863//27773535 chr6:76023963-76023964(-) m6A CDS//exon       24981863//27773535 chr6:76023987-76023988(-) m6A CDS//exon       24981863//27773535 chr6:76024153-76024154(-) m6A CDS//exon       24981863 chr6:76024165-76024166(-) m6A CDS//exon       24981863 chr6:76024245-76024246(-) m6A CDS//exon       24981863 chr6:76024281-76024282(-) m6A CDS//exon       24981863 chr6:76024302-76024303(-) m6A CDS//exon       24981863 chr6:76024349-76024350(-) m6A CDS//exon       24981863 chr6:76024429-76024430(-) m6A CDS//exon       24981863//27773535 chr6:76024473-76024474(-) m6A CDS//exon       27773535 chr6:76024505-76024506(-) m6A CDS//exon       27773535 chr6:76024587-76024588(-) m6A CDS//exon       24981863 chr6:76024635-76024636(-) m6A CDS//exon       24981863 chr6:76024642-76024643(-) m6A CDS//exon       24981863 chr6:76024672-76024673(-) m6A CDS//exon       24981863 chr6:76063316-76063317(-) m6A CDS       24981863 chr6:76124452-76124453(-) m6A CDS       24981863 chr6:76124483-76124484(-) m6A CDS       24981863 chr6:76124507-76124508(-) m6A CDS       24981863 chr6:76124528-76124529(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FILIP1	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: FILIP1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg