Basic Information:

  VIRBase ID:  

VHID00234305

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          CNPPD1:  NR_135629     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	CNPPD1
miRBase Accession/Entrez ID	MIMAT0001583	27013
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C2orf24//CGI-57

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CNPPD1	chr2:220037506-220037507(-) m6A CDS       24284625//24981863//28052920//27773535 chr2:220037566-220037567(-) m6A CDS       24284625//24981863//28052920//27773535//22608085 chr2:220037727-220037728(-) m6A CDS       24284625 chr2:220041041-220041042(-) m6A CDS       27371828//27773536 chr2:220041488-220041489(-) m6A CDS       27371828//27773536 chr2:220041518-220041519(-) m1A CDS       26863196//26863410 chr2:220041545-220041546(-) m6A CDS       24284625//25456834//27371828//27773536 chr2:220041618-220041619(-) m6A 5'UTR//intron       24284625//25456834//27371828//27773536 chr2:220041632-220041633(-) m6A 5'UTR//intron       24284625//25456834//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CNPPD1	Chromatin K562 cells     - Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: CNPPD1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg