Basic Information:

  VIRBase ID:  

VHID00234292

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          NARF:  NM_031968     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	NARF
miRBase Accession/Entrez ID	MIMAT0001583	26502
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IOP2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NARF	chr17:80441052(+) A-I      NonSyn:Gln->Arg chr17:80441136(+) A-I      NonSyn:Gln->Arg chr17:80441152(+) A-I      Syn:Ala->Ala chr17:80441107(+) A-I      Syn:Glu->Glu chr17:80423475(+) A-I      intronic chr17:80425990(+) A-I      intronic chr17:80424458(+) A-I      intronic chr17:80434501(+) A-I      intronic chr17:80430942(+) A-I      intronic chr17:80430897(+) A-I      intronic chr17:80417463(+) A-I      intronic chr17:80426009(+) A-I      intronic chr17:80426089(+) A-I      intronic chr17:80426002(+) A-I      intronic chr17:80425999(+) A-I      intronic chr17:80425979(+) A-I      intronic chr17:80425915(+) A-I      intronic chr17:80424474(+) A-I      intronic chr17:80424446(+) A-I      intronic chr17:80418408(+) A-I      intronic chr17:80418391(+) A-I      intronic chr17:80417467(+) A-I      intronic chr17:80440711(+) A-I      intronic chr17:80426076(+) A-I      intronic chr17:80426119(+) A-I      intronic chr17:80426037(+) A-I      intronic chr17:80424538(+) A-I      intronic chr17:80426036(+) A-I      intronic chr17:80426033(+) A-I      intronic chr17:80426030(+) A-I      intronic chr17:80426108(+) A-I      intronic chr17:80425924(+) A-I      intronic chr17:80425676(+) A-I      intronic chr17:80425566(+) A-I      intronic chr17:80425522(+) A-I      intronic chr17:80425467(+) A-I      intronic chr17:80425169(+) A-I      intronic chr17:80425022(+) A-I      intronic chr17:80424987(+) A-I      intronic chr17:80424529(+) A-I      intronic chr17:80424512(+) A-I      intronic chr17:80424478(+) A-I      intronic chr17:80424470(+) A-I      intronic chr17:80424428(+) A-I      intronic chr17:80424372(+) A-I      intronic chr17:80423677(+) A-I      intronic chr17:80426099(+) A-I      intronic chr17:80428577(+) A-I      intronic chr17:80423642(+) A-I      intronic chr17:80428908(+) A-I      intronic chr17:80428918(+) A-I      intronic chr17:80428919(+) A-I      intronic chr17:80431079(+) A-I      intronic chr17:80431551(+) A-I      intronic chr17:80427599(+) A-I      intronic chr17:80433299(+) A-I      intronic chr17:80433388(+) A-I      intronic chr17:80433452(+) A-I      intronic chr17:80427607(+) A-I      intronic chr17:80427608(+) A-I      intronic chr17:80434145(+) A-I      intronic chr17:80434453(+) A-I      intronic chr17:80434580(+) A-I      intronic chr17:80419475(+) A-I      intronic chr17:80419471(+) A-I      intronic chr17:80419407(+) A-I      intronic chr17:80419376(+) A-I      intronic chr17:80419366(+) A-I      intronic chr17:80419358(+) A-I      intronic chr17:80419238(+) A-I      intronic chr17:80426072(+) A-I      intronic chr17:80419060(+) A-I      intronic chr17:80418519(+) A-I      intronic chr17:80418455(+) A-I      intronic chr17:80419092(+) A-I      intronic chr17:80418253(+) A-I      intronic chr17:80418234(+) A-I      intronic chr17:80418220(+) A-I      intronic chr17:80434790(+) A-I      intronic chr17:80428510(+) A-I      intronic chr17:80425959(+) A-I      intronic chr17:80435053(+) A-I      intronic chr17:80435102(+) A-I      intronic chr17:80435106(+) A-I      intronic chr17:80435516(+) A-I      intronic chr17:80435625(+) A-I      intronic chr17:80435664(+) A-I      intronic chr17:80440653(+) A-I      intronic chr17:80440748(+) A-I      intronic chr17:80440770(+) A-I      intronic chr17:80440797(+) A-I      intronic chr17:80440812(+) A-I      intronic chr17:80441008(+) A-I      intronic chr17:80441030(+) A-I      intronic chr17:80441042(+) A-I      intronic chr17:80427869(+) A-I      intronic chr17:80428451(+) A-I      intronic chr17:80428546(+) A-I      intronic chr17:80428569(+) A-I      intronic chr17:80425938(+) A-I      intronic chr17:80428784(+) A-I      intronic chr17:80441127(+) A-I      NonSyn:Gln->Arg chr17:80441075(+) A-I      NonSyn:Ile->Val chr17:80425064(+) A-I      intronic chr17:80426261(+) A-I      intronic chr17:80430134(+) A-I      intronic chr17:80429243(+) A-I      intronic chr17:80419074(+) A-I      intronic chr17:80418622(+) A-I      intronic chr17:80419062(+) A-I      intronic chr17:80431589(+) A-I      intronic chr17:80434631(+) A-I      intronic chr17:80425520(+) A-I      intronic chr17:80440858(+) A-I      intronic chr17:80431818(+) A-I      intronic chr17:80418877(+) A-I      intronic chr17:80418453(+) A-I      intronic chr17:80439467(+) A-I      intronic chr17:80428860(+) A-I      intronic chr17:80425485(+) A-I      intronic chr17:80419304(+) A-I      intronic chr17:80418908(+) A-I      intronic chr17:80434978(+) A-I      intronic chr17:80425407(+) A-I      intronic chr17:80419239(+) A-I      intronic chr17:80418865(+) A-I      intronic chr17:80425660(+) A-I      intronic chr17:80435218(+) A-I      intronic chr17:80418884(+) A-I      intronic chr17:80440800(+) A-I      intronic chr17:80440746(+) A-I      intronic chr17:80431908(+) A-I      intronic chr17:80417598(+) A-I      intronic chr17:80425203(+) A-I      intronic chr17:80419009(+) A-I      intronic chr17:80418553(+) A-I      intronic chr17:80435265(+) A-I      intronic chr17:80439485(+) A-I      intronic chr17:80431989(+) A-I      intronic chr17:80440654(+) A-I      intronic chr17:80430158(+) A-I      intronic chr17:80426303(+) A-I      intronic chr17:80435433(+) A-I      intronic chr17:80434581(+) A-I      intronic chr17:80424766(+) A-I      intronic chr17:80431563(+) A-I      intronic chr17:80430217(+) A-I      intronic chr17:80440764(+) A-I      intronic chr17:80425009(+) A-I      intronic chr17:80418891(+) A-I      intronic chr17:80426010(+) A-I      intronic chr17:80418560(+) A-I      intronic chr17:80434655(+) A-I      intronic chr17:80427667(+) A-I      intronic chr17:80435577(+) A-I      intronic chr17:80439445(+) A-I      intronic chr17:80425547(+) A-I      intronic chr17:80419367(+) A-I      intronic chr17:80428948(+) A-I      intronic chr17:80435319(+) A-I      intronic chr17:80433398(+) A-I      intronic chr17:80426326(+) A-I      intronic chr17:80435524(+) A-I      intronic chr17:80440851(+) A-I      intronic chr17:80428861(+) A-I      intronic chr17:80430240(+) A-I      intronic chr17:80429177(+) A-I      intronic chr17:80418385(+) A-I      intronic chr17:80419292(+) A-I      intronic chr17:80427742(+) A-I      intronic chr17:80418581(+) A-I      intronic chr17:80424526(+) A-I      intronic chr17:80418561(+) A-I      intronic chr17:80418619(+) A-I      intronic chr17:80427754(+) A-I      intronic chr17:80425185(+) A-I      intronic chr17:80426050(+) A-I      intronic chr17:80435581(+) A-I      intronic chr17:80438643(+) A-I      intronic chr17:80430239(+) A-I      intronic chr17:80427665(+) A-I      intronic chr17:80419232(+) A-I      intronic chr17:80435286(+) A-I      intronic chr17:80419467(+) A-I      intronic chr17:80425561(+) A-I      intronic chr17:80425414(+) A-I      intronic chr17:80424409(+) A-I      intronic chr17:80418269(+) A-I      intronic chr17:80440691(+) A-I      intronic chr17:80419306(+) A-I      intronic chr17:80426107(+) A-I      intronic chr17:80431977(+) A-I      intronic chr17:80419000(+) A-I      intronic chr17:80424432(+) A-I      intronic chr17:80424509(+) A-I      intronic chr17:80435330(+) A-I      intronic chr17:80425976(+) A-I      intronic chr17:80434700(+) A-I      intronic chr17:80424590(+) A-I      intronic chr17:80418386(+) A-I      intronic chr17:80439440(+) A-I      intronic chr17:80427852(+) A-I      intronic chr17:80431982(+) A-I      intronic chr17:80426093(+) A-I      intronic chr17:80440749(+) A-I      intronic chr17:80424494(+) A-I      intronic chr17:80426067(+) A-I      intronic chr17:80419408(+) A-I      intronic chr17:80424468(+) A-I      intronic chr17:80435530(+) A-I      intronic chr17:80418457(+) A-I      intronic chr17:80419380(+) A-I      intronic chr17:80428964(+) A-I      intronic chr17:80426027(+) A-I      intronic chr17:80418086(+) A-I      intronic chr17:80425062(+) A-I      intronic chr17:80423710(+) A-I      intronic chr17:80425498(+) A-I      intronic chr17:80426166(+) A-I      intronic chr17:80427853(+) A-I      intronic chr17:80418973(+) A-I      intronic chr17:80433362(+) A-I      intronic chr17:80426026(+) A-I      intronic chr17:80435027(+) A-I      intronic chr17:80440598(+) A-I      intronic chr17:80418536(+) A-I      intronic chr17:80418829(+) A-I      intronic chr17:80419273(+) A-I      intronic chr17:80419052(+) A-I      intronic chr17:80441018(+) A-I      intronic chr17:80425427(+) A-I      intronic chr17:80440771(+) A-I      intronic chr17:80419469(+) A-I      intronic chr17:80434676(+) A-I      intronic chr17:80418815(+) A-I      intronic chr17:80435204(+) A-I      intronic chr17:80417545(+) A-I      intronic chr17:80424441(+) A-I      intronic chr17:80419233(+) A-I      intronic chr17:80426122(+) A-I      intronic chr17:80418811(+) A-I      intronic chr17:80440743(+) A-I      intronic chr17:80435445(+) A-I      intronic chr17:80426102(+) A-I      intronic chr17:80425580(+) A-I      intronic chr17:80418823(+) A-I      intronic chr17:80418987(+) A-I      intronic chr17:80418930(+) A-I      intronic chr17:80425023(+) A-I      intronic chr17:80419393(+) A-I      intronic chr17:80431904(+) A-I      intronic chr17:80427662(+) A-I      intronic chr17:80424429(+) A-I      intronic chr17:80426028(+) A-I      intronic chr17:80426007(+) A-I      intronic chr17:80431931(+) A-I      intronic chr17:80440788(+) A-I      intronic chr17:80425971(+) A-I      intronic chr17:80418986(+) A-I      intronic chr17:80435040(+) A-I      intronic chr17:80425932(+) A-I      intronic chr17:80431354(+) A-I      intronic chr17:80419226(+) A-I      intronic chr17:80425910(+) A-I      intronic chr17:80424433(+) A-I      intronic chr17:80435340(+) A-I      intronic chr17:80425987(+) A-I      intronic chr17:80424398(+) A-I      intronic chr17:80431364(+) A-I      intronic chr17:80439550(+) A-I      intronic chr17:80418983(+) A-I      intronic chr17:80435367(+) A-I      intronic chr17:80419302(+) A-I      intronic chr17:80419287(+) A-I      intronic chr17:80435517(+) A-I      intronic chr17:80439486(+) A-I      intronic chr17:80435508(+) A-I      intronic chr17:80419034(+) A-I      intronic chr17:80434779(+) A-I      intronic chr17:80426066(+) A-I      intronic chr17:80424591(+) A-I      intronic chr17:80431019(+) A-I      intronic chr17:80418890(+) A-I      intronic chr17:80441115(+) A-I      NonSyn:Glu->Gly chr17:80441048(+) A-I      NonSyn:Ser->Gly chr17:80441066(+) A-I      NonSyn:Thr->Ala chr17:80430249(+) A-I      intronic chr17:80441088(+) A-I      NonSyn:Gln->Arg chr17:80441043(+) A-I      NonSyn:Glu->Gly chr17:80419298(+) A-I      intronic chr17:80418991(+) A-I      intronic chr17:80439459(+) A-I      intronic chr17:80440828(+) A-I      intronic chr17:80418157(+) A-I      intronic chr17:80426008(+) A-I      intronic chr17:80424984(+) A-I      intronic chr17:80440836(+) A-I      intronic chr17:80426025(+) A-I      intronic chr17:80434135(+) A-I      intronic chr17:80435579(+) A-I      intronic chr17:80426325(+) A-I      intronic chr17:80441045(+) A-I      NonSyn:Ile->Val chr17:80441061(+) A-I      NonSyn:Stp->Trp chr17:80441123(+) A-I      NonSyn:Arg->Gly chr17:80435001(+) A-I      intronic chr17:80425654(+) A-I      intronic chr17:80433977(+) A-I      intronic chr17:80435652(+) A-I      intronic chr17:80441044(+) A-I      Syn:Glu->Glu chr17:80441110(+) A-I      Syn:Ser->Ser chr17:80426024(+) A-I      intronic chr17:80434593(+) A-I      intronic chr17:80425926(+) A-I      intronic chr17:80423631(+) A-I      intronic chr17:80440823(+) A-I      intronic chr17:80425564(+) A-I      intronic chr17:80431878(+) A-I      intronic chr17:80425184(+) A-I      intronic chr17:80425040(+) A-I      intronic chr17:80441134(+) A-I      Syn:Leu->Leu chr17:80424997(+) A-I      intronic chr17:80441074(+) A-I      Syn:Val->Val chr17:80441116(+) A-I      Syn:Glu->Glu chr17:80418917(+) A-I      intronic chr17:80418627(+) A-I      intronic chr17:80435565(+) A-I      intronic chr17:80425026(+) A-I      intronic chr17:80425481(+) A-I      intronic chr17:80433352(+) A-I      intronic chr17:80428635(+) A-I      intronic chr17:80431573(+) A-I      intronic chr17:80435651(+) A-I      intronic chr17:80426064(+) A-I      intronic chr17:80426040(+) A-I      intronic chr17:80419061(+) A-I      intronic chr17:80440775(+) A-I      intronic chr17:80425933(+) A-I      intronic chr17:80419035(+) A-I      intronic chr17:80418077(+) A-I      intronic chr17:80426132(+) A-I      intronic chr17:80425197(+) A-I      intronic chr17:80425632(+) A-I      intronic chr17:80419310(+) A-I      intronic chr17:80440693(+) A-I      intronic chr17:80426343(+) A-I      intronic chr17:80418920(+) A-I      intronic chr17:80425088(+) A-I      intronic chr17:80434459(+) A-I      intronic chr17:80426250(+) A-I      intronic chr17:80440606(+) A-I      intronic chr17:80418432(+) A-I      intronic chr17:80440810(+) A-I      intronic chr17:80435459(+) A-I      intronic chr17:80431811(+) A-I      intronic chr17:80418474(+) A-I      intronic chr17:80418282(+) A-I      intronic chr17:80418085(+) A-I      intronic chr17:80425103(+) A-I      intronic chr17:80426021(+) A-I      intronic chr17:80419340(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NARF	chr17:80441061(+) A-I exon CDS    15258596 chr17:80441074(+) A-I exon CDS    15258596 chr17:80441088(+) A-I exon CDS    15258596 chr17:80425932(+) A-I intron -    22327324 chr17:80425933(+) A-I intron -    22327324 chr17:80426250(+) A-I intron -    22327324 chr17:80445942(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NARF	chr17:80416238-80416239(+) m6A 5'UTR//exon       24981863//27773536 chr17:80416275-80416276(+) m6A 5'UTR//exon       24981863//27773536 chr17:80416336-80416337(+) m6A 5'UTR//exon       24981863 chr17:80416353-80416354(+) m6A 5'UTR//exon       24981863 chr17:80416365-80416366(+) m6A 5'UTR//exon       24981863 chr17:80416584-80416585(+) m6A 5'UTR//intron       24981863 chr17:80417882-80417883(+) m6A 5'UTR//CDS//exon       - chr17:80417888-80417889(+) m6A 5'UTR//CDS//exon       - chr17:80417986-80417987(+) m6A CDS//intron       - chr17:80418270-80418271(+) m6A 3'UTR//intron       - chr17:80418330-80418331(+) m6A 3'UTR//intron       - chr17:80418349-80418350(+) m6A 3'UTR//intron       - chr17:80418393-80418394(+) m6A 3'UTR//intron       - chr17:80418439-80418440(+) m6A 3'UTR//intron       - chr17:80418462-80418463(+) m6A 3'UTR//intron       - chr17:80420592-80420593(+) Cm intron       - chr17:80421454-80421455(+) m6A intron       - chr17:80421474-80421475(+) m6A intron       - chr17:80442388-80442389(+) m6A exon//intron       24981863//22608085 chr17:80442393-80442394(+) m6A exon//intron       24981863//22608085 chr17:80442398-80442399(+) m6A exon//intron       24981863//22608085 chr17:80442420-80442421(+) m6A exon//intron       25456834//24981863//22608085 chr17:80442517-80442518(+) m6A exon//intron       24284625//25456834//24981863//22608085 chr17:80442540-80442541(+) m6A exon//intron       24284625//25456834//24981863//22608085 chr17:80442558-80442559(+) m6A exon//intron       - chr17:80442592-80442593(+) m6A exon//intron       - chr17:80442663-80442664(+) m6A exon//intron       - chr17:80442696-80442697(+) m6A 3'UTR//CDS//exon//intron       - chr17:80442708-80442709(+) m6A 3'UTR//CDS//exon//intron       - chr17:80442766-80442767(+) m6A 3'UTR//CDS//exon//intron       - chr17:80445856-80445857(+) Cm 3'UTR//CDS//exon//intron       - chr17:80446019-80446020(+) m6A 3'UTR//CDS//exon//intron       24981863//22608085 chr17:80446122-80446123(+) m6A 3'UTR//exon       24981863//22608085 chr17:80446134-80446135(+) m6A 3'UTR//exon       24981863//22608085 chr17:80446519-80446520(+) m6A 3'UTR       24981863 chr17:80447058-80447059(+) m6A 3'UTR       24284625 chr17:80447189-80447190(+) m6A 3'UTR       24981863 chr17:80447236-80447237(+) m6A 3'UTR       24981863 chr17:80447262-80447263(+) m6A 3'UTR       24981863 chr17:80447287-80447288(+) m6A 3'UTR       24981863 chr17:80448074-80448075(+) m6A 3'UTR       24981863 chr17:80448084-80448085(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NARF	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: NARF

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg