Basic Information:

  VIRBase ID:  

VHID00233571

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          GPR55:  NM_005683     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	GPR55
miRBase Accession/Entrez ID	MIMAT0001583	9290
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LPIR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GPR55	chr2:231787665(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GPR55	chr2:231772171-231772172(-) m6A 3'UTR       - chr2:231772248-231772249(-) m6A 3'UTR       - chr2:231772282-231772283(-) m6A 3'UTR       - chr2:231772301-231772302(-) m6A 3'UTR       - chr2:231772322-231772323(-) m6A 3'UTR       - chr2:231772398-231772399(-) m6A 3'UTR       - chr2:231772436-231772437(-) m6A 3'UTR       - chr2:231772448-231772449(-) m6A 3'UTR       - chr2:231772744-231772745(-) m6A 3'UTR       27371828 chr2:231772773-231772774(-) m6A 3'UTR       27371828 chr2:231772779-231772780(-) m6A 3'UTR       27371828 chr2:231772827-231772828(-) m6A 3'UTR       27371828 chr2:231772834-231772835(-) m6A 3'UTR       27371828 chr2:231772865-231772866(-) m6A 3'UTR       27371828 chr2:231772893-231772894(-) m6A 3'UTR       27371828 chr2:231772939-231772940(-) m6A 3'UTR       27371828 chr2:231772944-231772945(-) m6A 3'UTR       27371828 chr2:231772949-231772950(-) m6A 3'UTR       27371828 chr2:231772954-231772955(-) m6A 3'UTR       27371828 chr2:231773097-231773098(-) m6A 3'UTR//intron       27371828 chr2:231773157-231773158(-) m6A 3'UTR//intron       27371828 chr2:231773258-231773259(-) m6A 3'UTR//intron       - chr2:231773264-231773265(-) m6A 3'UTR//intron       - chr2:231773392-231773393(-) m6A 3'UTR//intron       28052920//27371828 chr2:231773561-231773562(-) m6A 3'UTR//intron       28052920 chr2:231773568-231773569(-) m6A 3'UTR//intron       28052920 chr2:231773782-231773783(-) m6A 3'UTR//intron       - chr2:231773823-231773824(-) m6A 3'UTR//intron       27371828 chr2:231773847-231773848(-) m6A 3'UTR//intron       27371828 chr2:231773876-231773877(-) m6A 3'UTR//intron       27371828 chr2:231773969-231773970(-) m6A 3'UTR//intron       24209618//28052920//27371828 chr2:231773991-231773992(-) m6A 3'UTR//intron       24209618//28052920//27371828 chr2:231774054-231774055(-) m6A 3'UTR//intron       24209618//28052920//27371828 chr2:231774197-231774198(-) m6A 3'UTR//intron       - chr2:231774223-231774224(-) m6A 3'UTR//intron       - chr2:231774232-231774233(-) m6A 3'UTR//intron       - chr2:231774421-231774422(-) m6A 3'UTR       - chr2:231774455-231774456(-) m6A 3'UTR       - chr2:231774487-231774488(-) m6A 3'UTR       - chr2:231774495-231774496(-) m6A 3'UTR       - chr2:231774533-231774534(-) m6A 3'UTR       - chr2:231774553-231774554(-) m6A 3'UTR       - chr2:231774709-231774710(-) m6A 3'UTR       - chr2:231774739-231774740(-) m6A CDS       - chr2:231774784-231774785(-) m6A CDS       - chr2:231774916-231774917(-) m6A CDS       - chr2:231775027-231775028(-) m6A CDS       - chr2:231775039-231775040(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GPR55	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: GPR55

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg