Basic Information:

  VIRBase ID:  

VHID00233395

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          NR4A3:  NM_173199     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	NR4A3
miRBase Accession/Entrez ID	MIMAT0001583	8013
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CHN//CSMF//MINOR//NOR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NR4A3	chr9:102606136(+) A-I      intronic chr9:102606135(+) A-I      intronic chr9:102606129(+) A-I      intronic chr9:102624835(+) A-I      intronic chr9:102624595(+) A-I      intronic chr9:102624592(+) A-I      intronic chr9:102624848(+) A-I      intronic chr9:102624840(+) A-I      intronic chr9:102606097(+) A-I      intronic chr9:102606110(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NR4A3	chr9:102624275(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NR4A3	chr9:102584283-102584284(+) m6A 5'UTR       24284625//24981863//26404942 chr9:102587989-102587990(+) m6A 5'UTR       24284625 chr9:102588074-102588075(+) m6A 5'UTR       24284625 chr9:102590384-102590385(+) m6A CDS       24284625//24981863//26404942 chr9:102590418-102590419(+) m6A CDS       24284625//24981863//26404942 chr9:102590445-102590446(+) m6A CDS       24284625//24981863//26404942 chr9:102590533-102590534(+) m6A CDS       24284625//24981863//26404942 chr9:102591245-102591246(+) m6A CDS       26404942 chr9:102594973-102594974(+) m6A CDS       26404942 chr9:102595016-102595017(+) m6A CDS       26404942 chr9:102595028-102595029(+) m6A CDS       26404942 chr9:102595043-102595044(+) m6A CDS       26404942 chr9:102595612-102595613(+) m6A CDS       26404942 chr9:102595636-102595637(+) m6A CDS       26404942 chr9:102595704-102595705(+) m6A CDS       26404942 chr9:102607074-102607075(+) m6A CDS       26404942 chr9:102607118-102607119(+) m6A CDS       26404942 chr9:102609723-102609724(+) m6A CDS       26404942 chr9:102609757-102609758(+) m6A CDS       24284625//26404942 chr9:102609819-102609820(+) m6A CDS       24284625//24981863//26404942 chr9:102609846-102609847(+) m6A CDS       24284625//26404942 chr9:102625905-102625906(+) m6A CDS       24284625//26404942//22575960 chr9:102625920-102625921(+) m6A CDS       24284625//24981863//26404942//22608085 chr9:102625970-102625971(+) m6A CDS       24284625//24981863//26404942//22608085 chr9:102625986-102625987(+) m6A CDS       24284625//24981863//26404942//22608085 chr9:102626034-102626035(+) m6A CDS       24284625//24981863//26404942 chr9:102626090-102626091(+) m6A CDS       24284625//24981863//26404942 chr9:102626132-102626133(+) m6A CDS       24284625//24981863//26404942 chr9:102626224-102626225(+) m6A 3'UTR       24981863//26404942 chr9:102626280-102626281(+) m6A 3'UTR       24981863//26404942 chr9:102626327-102626328(+) m6A 3'UTR       24981863//26404942 chr9:102626442-102626443(+) m6A 3'UTR       26404942 chr9:102626490-102626491(+) m6A 3'UTR       26404942 chr9:102626533-102626534(+) m6A 3'UTR       26404942 chr9:102626539-102626540(+) m6A 3'UTR       26404942 chr9:102626632-102626633(+) m6A 3'UTR       26404942 chr9:102626643-102626644(+) m6A 3'UTR       26404942 chr9:102626713-102626714(+) m6A 3'UTR       26404942 chr9:102626723-102626724(+) m6A 3'UTR       26404942 chr9:102626749-102626750(+) m6A 3'UTR       26404942 chr9:102626922-102626923(+) m6A 3'UTR       26404942 chr9:102626945-102626946(+) m6A 3'UTR       26404942 chr9:102626998-102626999(+) m6A 3'UTR       26404942 chr9:102627056-102627057(+) m6A 3'UTR       26404942 chr9:102627138-102627139(+) m6A 3'UTR       26404942 chr9:102627156-102627157(+) m6A 3'UTR       26404942 chr9:102627183-102627184(+) m6A 3'UTR       26404942 chr9:102627234-102627235(+) m6A 3'UTR       26404942 chr9:102627443-102627444(+) m6A 3'UTR       26404942 chr9:102627494-102627495(+) m6A 3'UTR       26404942 chr9:102628129-102628130(+) m6A 3'UTR       26404942 chr9:102628159-102628160(+) m6A 3'UTR       26404942 chr9:102628218-102628219(+) m6A 3'UTR       26404942 chr9:102628258-102628259(+) m6A 3'UTR       26404942 chr9:102628279-102628280(+) m6A 3'UTR       26404942 chr9:102628285-102628286(+) m6A 3'UTR       26404942 chr9:102628350-102628351(+) m6A 3'UTR       26404942 chr9:102628428-102628429(+) m6A 3'UTR       26404942 chr9:102628486-102628487(+) m6A 3'UTR       26404942 chr9:102628601-102628602(+) m6A 3'UTR       26404942 chr9:102628606-102628607(+) m6A 3'UTR       26404942 chr9:102628617-102628618(+) m6A 3'UTR       26404942 chr9:102628678-102628679(+) m6A 3'UTR       26404942 chr9:102628908-102628909(+) m6A 3'UTR       26404942 chr9:102628966-102628967(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NR4A3	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: NR4A3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg