Basic Information:

  VIRBase ID:  

VHID00232882

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          NFKBIE:  NM_004556     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	NFKBIE
miRBase Accession/Entrez ID	MIMAT0001583	4794
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IKBE

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NFKBIE	chr6:44226177-44226178(-) m6A 3'UTR       24209618//27773535//27371828 chr6:44226197-44226198(-) m6A 3'UTR       24209618//27773535//27371828 chr6:44226236-44226237(-) m6A 3'UTR       24209618//27773535//27371828 chr6:44226361-44226362(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr6:44226487-44226488(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr6:44226508-44226509(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:44226524-44226525(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:44226532-44226533(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:44226567-44226568(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr6:44226588-44226589(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:44226608-44226609(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:44226632-44226633(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr6:44226725-44226726(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr6:44226742-44226743(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr6:44226790-44226791(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr6:44226846-44226847(-) m6A 3'UTR//intron       24284625//24209618//25456834//28052920//27773535//27371828//27773536//22608085 chr6:44226976-44226977(-) m6A CDS       24284625 chr6:44227792-44227793(-) m6A CDS       - chr6:44232808-44232809(-) m6A CDS       24284625//27773536 chr6:44232912-44232913(-) m6A CDS       24284625//27371828//27773536 chr6:44232924-44232925(-) m6A CDS       24284625//27371828//27773536 chr6:44233112-44233113(-) m6A 5'UTR//CDS       24209618//27371828//27773536 chr6:44233165-44233166(-) m6A 5'UTR//CDS       24209618//28052920//27371828//27773536 chr6:44233253-44233254(-) m6A 5'UTR//CDS       24209618//24981863//28052920//27371828//27773536 chr6:44233271-44233272(-) m6A 5'UTR//CDS       24209618//24981863//28052920//27371828//27773536 chr6:44233314-44233315(-) m6A 5'UTR//CDS       24209618//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NFKBIE	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: NFKBIE

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg